Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 8e-20
 Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 3/226 (1%)

Query: 4   PKFAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQG 63
           P + ++K+ +   I  G +  ++R+PSE++L + F  SR+T R+AL +L   G++ +  G
Sbjct: 11  PLYTQLKELLRERILDGTYPSHSRMPSESELGKAFDVSRITVRQALGDLQKEGLIFKIHG 70

Query: 64  LGTFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPVF 123
            GTFVA  K+  ++  ++ + + +   G+    +  +   V A A +A  L ++ GS V 
Sbjct: 71  KGTFVAKPKAFQNVSTLQGLGESMTQMGYEVINRLRSFRHVPANALVAARLQVEEGSLVT 130

Query: 124 HSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQVAPLTEAHH--TIEAI 181
               V      P+ +E  ++  A        D   +     L     +   H    I+A+
Sbjct: 131 EIRRVRLINREPVSLELTWLPKAVGEKLEKADLVTRDIFLLLENDCGIALGHADLAIDAV 190

Query: 182 IASSELQQRLAIPATEPCLQISRRTWSRQGV-VSFAKLVHPGSRFK 226
           +A S+L Q L +    P ++I R T +  G  + F  L + G  F+
Sbjct: 191 LADSDLTQALDVEEGSPIMRIERLTHAADGTPLDFEHLYYRGDAFQ 236