Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., Putative alkanesulfonate metabolism utilization regulator from Pseudomonas sp. S08-1

 Score = 86.7 bits (213), Expect = 4e-22
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 4   PKFAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQG 63
           P ++++K+ + G I  G +  ++R+PSE++L + F  SR+T R+AL +L   G++ +  G
Sbjct: 11  PLYSQLKELLRGRILDGTYPPHSRMPSESELGQAFGVSRITVRQALGDLQKEGLIFKIHG 70

Query: 64  LGTFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPVF 123
            GTFVA  K+  ++  ++ +A+ +   G+    +  +L+ + A A +A  L L+ G+PV 
Sbjct: 71  KGTFVAKPKAFQNVSTLQGLAESMLQMGYEVINRLHSLKHLPADARVAERLGLEEGAPVT 130

Query: 124 HSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQVAPLTEAHH--TIEAI 181
               V      P+ +E  YV  A        D   +     +     +   H    I+A+
Sbjct: 131 EIKRVRLVNREPVSLEVTYVPRAVGEKLEKADLVARDIFLIIENDCGIALGHADLAIDAV 190

Query: 182 IASSELQQRLAIPATEPCLQISRRTWSRQGV-VSFAKLVHPGSRFK 226
           +A ++L + L +    P ++I R T +  G  + F  L + G  F+
Sbjct: 191 LADADLTRALNVEEGAPIMRIERLTHAADGTPLDFEYLYYRGDAFQ 236