Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 266 a.a., GntR family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score = 73.2 bits (178), Expect = 5e-18
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 17/216 (7%)

Query: 3   TPKFAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQ 62
           +P + +IK  IT  +ESGEW+    +PSE +LA  +  S+ T R+A+ EL  + +L R Q
Sbjct: 33  SPLYQQIKALITQSLESGEWKPGEIIPSEVELAARYKVSQGTVRKAIDELAADNLLVRRQ 92

Query: 63  GLGTFVAGRKSQSSMLA-IRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSP 121
           G GTFVA    + +    +R +AD+  +  H +  + L   ++ A+A IA  L L    P
Sbjct: 93  GKGTFVATHNEERAQFRFLRLLADDGAE--HPHISRLLECRRLRASADIARQLDLKPADP 150

Query: 122 VFHSILVHCEQGVPLQVEERYVNPAFAPDYLVQDFSEQTPHEYLSQVAPLTE-------- 173
           V     V  ++ +    E+  ++  + P  + +  + +   EY   +  + E        
Sbjct: 151 V-----VLIKRLLTFDGEDTVLDEIWLPGGVFRGLTLERLSEYKGPLYAMFETEFGTRMI 205

Query: 174 -AHHTIEAIIASSELQQRLAIPATEPCLQISRRTWS 208
            A   I A+ A   +   L +P   P L + R +++
Sbjct: 206 RASEKIRAVAADPSVADLLHVPTGFPLLSVERVSYT 241