Pairwise Alignments

Query, 235 a.a., histidine utilization repressor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 243 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score = 72.4 bits (176), Expect = 7e-18
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 6   FAEIKQYITGCIESGEWEENARVPSENQLAELFVCSRMTARRALTELTDNGVLERSQGLG 65
           +A ++Q +   I  G ++   ++P+EN+L   +  SR+T R+A+++L  +GVL R QG G
Sbjct: 13  YATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKG 72

Query: 66  TFVAGRKSQSSMLAIRNIADEIKDRGHGYSVQQLALEQVNATAPIAIALALDVGSPVFHS 125
           TFV  +K ++++L +    D    +G     + +  E+V+A AP    L +   S VFH 
Sbjct: 73  TFVQSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSA-APFCEKLNIPGNSEVFHL 131

Query: 126 ILVHCEQGVPLQVEERYVNPAFAPDY 151
             V      PL ++  ++  +  PD+
Sbjct: 132 CRVMYLDKEPLFIDSSWIPLSRYPDF 157