Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 884 a.a., sensor protein from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 5e-37
 Identities = 84/248 (33%), Positives = 134/248 (54%), Gaps = 6/248 (2%)

Query: 102 LLAALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLS 161
           L  AL  ++LA+     +   E  QLR+++L SVSHDLRTPL  + G++ +L      + 
Sbjct: 626 LAQALARARLAEQLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALGDAIP 685

Query: 162 PAQTEELIDSAAAESHRLHQYIENLLQANKLQHGALKFSLDEANIREVLQRTIARFQTEQ 221
                EL++    E+ RL +YI+NLL   +L HG LK + D     +++   + R +   
Sbjct: 686 AEDRRELLEGTRNEAERLDRYIQNLLDMTRLGHGGLKLARDWVAPADIVGSALNRLRVVL 745

Query: 222 PRIQIQSE--PELPSLMICSSLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQ 279
             +++ ++   ELP L + ++LIEQA+ NVL+NA  +SPA   + + +  H   LR+ + 
Sbjct: 746 APLRVHTDVPTELPLLFVHAALIEQALVNVLENAARFSPANGRLELQVAVHDDQLRLTVS 805

Query: 280 DQGKGIAPSQTGAIFELFYRQHPTTDG--GAGLGLPVAKGIITAHNGTISAEK--VAHGS 335
           DQG GI  +    IF++FY       G  G GLGL + +G+I AH G I   +     G+
Sbjct: 806 DQGPGIPEADREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGQILVGEGIDGQGT 865

Query: 336 LIRIALPI 343
            I + LP+
Sbjct: 866 SITLCLPL 873



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 33/95 (34%), Positives = 50/95 (52%)

Query: 45  VLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFLFTAPRYSLQMLNVEDIVNLTVFLLA 104
           + L+   AV++VA++ S   A   A    + ++FLF  P +S  +   ED++ L  FLL 
Sbjct: 416 ISLVFLAAVLLVAVRSSLGPALACAALSFLVYDFLFIPPNFSFTIQREEDVLTLVFFLLM 475

Query: 105 ALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDL 139
           A  +  LA   RRQ  AL + Q + S LL +S  L
Sbjct: 476 AALTGNLAARQRRQLQALRETQAQTSQLLDLSRRL 510