Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 951 a.a., DUF4118 domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  105 bits (262), Expect = 5e-27
 Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 20/223 (8%)

Query: 121 ALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQTE---ELIDSAAAESH 177
           ++E  +LRNS+L ++SHDLRTPL  I+G  + L   +   +    E   EL+D+   E+ 
Sbjct: 675 SMESERLRNSLLSAISHDLRTPLTAIVGFSSMLAAQRDAQTDKHNEAQGELVDAIHEEAL 734

Query: 178 RLHQYIENLLQANKLQHGALK----FSLDEANIREVL---QRTIARFQTEQPRIQIQSEP 230
           R+   + NLL   +LQ G+LK    +SL E  +   L   +RT+AR       +++    
Sbjct: 735 RMTGIVTNLLDMARLQAGSLKLNRQWSLLEETVGSALRDCRRTLARHP-----VKVSLPA 789

Query: 231 ELPSLMICSSLIEQAIFNVLDNALHYSPATQPVTVSLY----RHQHMLRIDIQDQGKGIA 286
           +LP L + + L+E+   N+ +NA  Y P   P+T+S        +  +R+ + D G G+ 
Sbjct: 790 DLPLLQLDAVLMERLFANLFENAAKYVPPDTPLTISAQCIDENDKPFVRVTVDDTGPGLP 849

Query: 287 PSQTGAIFELFYR-QHPTTDGGAGLGLPVAKGIITAHNGTISA 328
                 IFE F R +  +   G GLGL + + I  AH G I A
Sbjct: 850 AGMEARIFEKFTRGEKESAKPGIGLGLAICRAIAEAHGGKIGA 892



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 27  VVLITSYFIDVFSGSAIAVLLILQLAVVVVALQCSANYAYFVAVFGAVSFNFLFTAPRYS 86
           V LI S  ID    + + +L +L   V+  A++        ++     +F+F F  PR S
Sbjct: 424 VTLIASQLIDRIDLANLVMLYLL--GVIFTAVRLGRGPGVMLSFLSVAAFDFFFVPPRMS 481

Query: 87  LQMLNVEDIVNLTVFLLAALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPLAT 145
           L + + + ++     LL +L    L    RR+     + + R   + +++ +L   L T
Sbjct: 482 LSVSDTQYLLTFLGMLLTSLVIGHLTSSLRREASVARRREQRTGAMYAMARELAAALTT 540