Pairwise Alignments

Query, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 867 a.a., sensor histidine kinase KdpD from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  132 bits (333), Expect = 3e-35
 Identities = 81/249 (32%), Positives = 133/249 (53%), Gaps = 11/249 (4%)

Query: 105 ALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQ 164
           AL  + LA      +      + R +++ SVSHDLRTPL+T++G+ TTL +Y   L P  
Sbjct: 609 ALERADLAGQALETETLRRADRFRAALMNSVSHDLRTPLSTVLGSATTLIDYGATLKPEV 668

Query: 165 TEELIDSAAAESHRLHQYIENLLQANKLQHGALKFSLDEANIREVLQRTIARFQTEQPRI 224
            ++L+ S   E+ RL +Y+ +LL   +L+ G L    D  ++R++L     R      R 
Sbjct: 669 RDDLLLSIREEAERLSRYVGDLLDMTRLEGGGLNVRTDWTDVRDILNTAADRVSRRLGRR 728

Query: 225 QIQSE--PELPSLMICSSLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQDQG 282
           ++  +   +L  +     L+EQA+ N+L+NA+ YSP    + ++ Y  +  + I I+D+G
Sbjct: 729 KVTRDFPAQLSMVEADPGLLEQAVVNILENAIAYSPDGTTIELAAYEDRGAVVISIEDEG 788

Query: 283 KGIAPSQTGAIFELFYRQHPTTD--GGAGLGLPVAKGIITAHNGTISAEKV-------AH 333
           +GI  ++   +F+ F R   +TD   GAGLGL +AKG + A  G I+A            
Sbjct: 789 RGIPTAELERVFDKFRRMEESTDRAKGAGLGLAIAKGFVEAMRGRIAAASPIQDDADGKR 848

Query: 334 GSLIRIALP 342
           G+ I I+LP
Sbjct: 849 GTRILISLP 857



 Score = 42.7 bits (99), Expect = 4e-08
 Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 9/130 (6%)

Query: 13  WRTHPA---LFTAMLLVVVLITSYFIDVFSGSAIAVLLILQLAVVVVALQCSANYAYFVA 69
           WR +PA      A     +L+ + F  V  G      +I   AVV   +      A   A
Sbjct: 367 WRGYPAGAGFVLAATGAALLLDTRFERVDLG------VIYLAAVVAAGVLNGLRPALAAA 420

Query: 70  VFGAVSFNFLFTAPRYSLQMLNVEDIVNLTVFLLAALTSSKLAKHYRRQQDALEQAQLRN 129
               +++NFLF  PRYS  + +  D + L +F   AL +  LA   R Q  A ++     
Sbjct: 421 TLAFLTYNFLFLQPRYSFLIGSPTDFLTLLLFWGVALGTGALAGRVREQARAAQRRAAAV 480

Query: 130 SILLSVSHDL 139
           S LL+ S  L
Sbjct: 481 SALLAASQTL 490