Pairwise Alignments

Query, 188 a.a., topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 185 a.a., topoisomerase DNA-binding C4 zinc finger domain-containing protein from Pectobacterium carotovorum WPP14

 Score =  170 bits (431), Expect = 1e-47
 Identities = 72/166 (43%), Positives = 106/166 (63%), Gaps = 2/166 (1%)

Query: 18  EKEYELCPECGSELSVKHSKHGSFIGCNNYPNCAYTRPL-VQHESIETQVIEGSKCPECG 76
           EK+ E+CP+CGS L ++  +HG F+GC+ YP C + RPL  Q +    +V++G +CP C 
Sbjct: 9   EKKQEICPDCGSVLVIRSGRHGPFLGCSAYPECEFIRPLKAQADGHIVKVLDGQQCPLCQ 68

Query: 77  HELAVKSGRFGIFIGCTQYPSCTHIERPDQESDKPQVACPECKTGKLEHRTSRFGKGFYA 136
             L ++ GR+G+FIGC  YP C H E  D+  D+  + CP+C  G L  R SR+GK F++
Sbjct: 69  STLVLRQGRYGMFIGCGNYPECHHTETIDRP-DETAIRCPQCNEGTLLQRKSRYGKVFHS 127

Query: 137 CSAYPKCKFIVNYPPVGETCPSCGFGILVERKGAAGMRLECPQKSC 182
           C  YP C+F +N+ P+   CPSC + +L E+K A G++L C  K C
Sbjct: 128 CDRYPDCQFTLNHKPIAGECPSCHYALLFEKKTAQGIKLFCASKLC 173