Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 173 a.a., Peptide deformylase (EC 3.5.1.88) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  174 bits (441), Expect = 7e-49
 Identities = 92/165 (55%), Positives = 117/165 (70%), Gaps = 1/165 (0%)

Query: 2   ALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIVM 61
           +LL +LR+PD RL T A P+   +  ++  I+ MFETMY   GIGLAATQVD H++LIV+
Sbjct: 5   SLLPILRYPDPRLHTVAKPVQAVDDRIRVLIERMFETMYDANGIGLAATQVDVHERLIVI 64

Query: 62  DLQDEVERPKVFINPEII-ASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEFT 120
           D+ +  +   V INPEI  AS      EEGCLSVPGIY  V+R+  V V+ALD  G E T
Sbjct: 65  DVSEARDERLVLINPEIEWASPEKRKGEEGCLSVPGIYDGVERSIAVRVRALDADGVERT 124

Query: 121 VEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQ 165
           +EA+ + A+CIQHEMDHL GK+FV+YLSPLKR RIK KL KA ++
Sbjct: 125 IEAEGMLAVCIQHEMDHLLGKVFVEYLSPLKRDRIKSKLVKAQRE 169