Pairwise Alignments

Query, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 170 a.a., peptide deformylase from Magnetospirillum magneticum AMB-1

 Score =  133 bits (334), Expect = 2e-36
 Identities = 76/168 (45%), Positives = 106/168 (63%), Gaps = 3/168 (1%)

Query: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           MA+L +L  PD  L++++ P+   +  ++T + DM +TMY   GIGLAA Q+   +++IV
Sbjct: 1   MAVLPILTAPDPVLKSKSKPVATVDDRIRTLLADMLDTMYHAPGIGLAAPQIGVLERVIV 60

Query: 61  MDL--QDEVERPKVFINPEII-ASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           MD+  ++E   P   +NPEI+ AS  D   EEGCLSVP  Y+ V R   V V+ LD  G 
Sbjct: 61  MDIGRKEEDRAPIRMVNPEIVWASDEDNTYEEGCLSVPEHYSNVVRPASVKVRYLDETGA 120

Query: 118 EFTVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQ 165
           +  + AD L A  +QHEMDHL G LF+D+LS LKR  I +KL KA K+
Sbjct: 121 KQEILADGLLATVVQHEMDHLDGILFIDHLSSLKRNMILRKLLKARKE 168