Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 327 a.a., methionyl-tRNA formyltransferase from Paraburkholderia sabiae LMG 24235

 Score =  269 bits (687), Expect = 8e-77
 Identities = 148/306 (48%), Positives = 193/306 (63%), Gaps = 9/306 (2%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           L +IFAGTP+FAA  L A+  +   V  V TQPDRPAGRG KL ASPVK  A  H I V 
Sbjct: 5   LRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAGRGMKLQASPVKRYAQDHGIEVA 64

Query: 64  QPGSLRKE---PAQ-----QELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILP 115
           QP SLR+    PA+      +L +   D+MVV AYGL+LP+ VLD    GCIN+H S+LP
Sbjct: 65  QPPSLRRNGKFPAEATAAIDQLRATPHDVMVVAAYGLLLPQEVLDIAPHGCINIHASLLP 124

Query: 116 RWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQG 175
           RWRGAAPI RA+ AGD ETG+T+MQMD GLDTG M+ +   PI   DT+A+L+++LA  G
Sbjct: 125 RWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMISEARTPIAGTDTTATLHDRLAEAG 184

Query: 176 PDALLQALEGL-ANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWP 234
              ++ AL  L  +G LA+  Q    A YAEK+ K +A LDW + A +L ++VRAF+P+P
Sbjct: 185 AKLIVDALIELERSGKLASTPQPAEGATYAEKIGKHQAALDWRRPAAELARQVRAFDPFP 244

Query: 235 VSYFEHQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPL 294
                  G  +K+W        S A PGTI++ S +G+ V+ G+G L +  +Q PG K L
Sbjct: 245 GGAATLDGAVLKIWSAAAIDAPSKAEPGTIVDVSPEGVVVACGEGALRITQLQKPGGKRL 304

Query: 295 SVADIL 300
            V D L
Sbjct: 305 PVRDFL 310