Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., methionyl-tRNA formyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  221 bits (562), Expect = 2e-62
 Identities = 116/299 (38%), Positives = 184/299 (61%), Gaps = 3/299 (1%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           L I+F GTPDFA   LQ L+   +NV+AV T PD+PAGRG+KL  SPVKE A++  IPV 
Sbjct: 5   LRIVFMGTPDFAVPTLQTLVEHKYNVVAVITAPDKPAGRGQKLNQSPVKEYAVAQGIPVL 64

Query: 64  QPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPI 123
           QP +L+ E   +EL S  A++ ++VA+ + LP+VV   P LG  N+H S+LP++RGAAPI
Sbjct: 65  QPTNLKSEAFLEELRSYRANLQIIVAFRM-LPEVVWAMPALGSFNIHASLLPQYRGAAPI 123

Query: 124 QRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQAL 183
             A+  G++ETGVT   +   +DTGD++ +  +PI ++D   SLYEKL  +G +  L+ +
Sbjct: 124 NWAIINGERETGVTSFFLKHEIDTGDLIYQERVPILEEDDFGSLYEKLKNKGAELALRTV 183

Query: 184 EGLANGTLAAEKQDETL-ANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFEHQG 242
           + +    +  + Q  +    +A K+ K+   + W + A Q+   +R  +P+P ++    G
Sbjct: 184 QAIERNEVQPQPQVVSAETKHAPKIFKDTCEIYWDQPAGQVHNFIRGLSPYPAAWTRLNG 243

Query: 243 NTIKVWQTQ-VSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADIL 300
            T KV++ + +   + T+APG+I   +K  + + T  G + LL +Q+ GKK + V D+L
Sbjct: 244 KTFKVFKVETLEDAAYTSAPGSIHTDNKTFLHIQTAAGAIALLDLQMEGKKRMPVQDLL 302