Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., Methionyl-tRNA formyltransferase (EC 2.1.2.9) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  286 bits (732), Expect = 5e-82
 Identities = 157/305 (51%), Positives = 195/305 (63%), Gaps = 8/305 (2%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           + +IFAGTP+FA   L+ L+ +   V  V +QPDRPAGRG KL ASPVK+LAL   I V 
Sbjct: 1   MKLIFAGTPEFARVALERLLAAGFTVPLVLSQPDRPAGRGMKLQASPVKQLALERQIAVA 60

Query: 64  QPGSLRKE--------PAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILP 115
           QP SLR +         A+  + +  AD MVV AYGLILP+ VL  PRLGC+N+H S+LP
Sbjct: 61  QPRSLRLDGKYPDDAAAARDAIEAAQADAMVVAAYGLILPQWVLGAPRLGCLNIHASLLP 120

Query: 116 RWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQG 175
           RWRGAAPI RA+ AGD +TGVTIMQMD GLDTGDMLL   LPI+ +DT+ SL+++LA+ G
Sbjct: 121 RWRGAAPIHRAIEAGDAQTGVTIMQMDAGLDTGDMLLIERLPIQAEDTTGSLHDRLAVLG 180

Query: 176 PDALLQALEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPV 235
              +++ALE    G L AEKQ      YA K+ K EA +DW   A  L + VRAFNP+P 
Sbjct: 181 GRLIVEALEIAVCGGLKAEKQPAEGVTYAHKIEKAEAAIDWAAPAETLARRVRAFNPFPG 240

Query: 236 SYFEHQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLS 295
           +     G  IKVW       S+ AAPG ++ A   GI V+TG GVL L  +Q  G K L 
Sbjct: 241 AATALAGEAIKVWSAHAEDASAQAAPGQVLAADADGIRVATGRGVLVLTELQRAGGKRLV 300

Query: 296 VADIL 300
            AD L
Sbjct: 301 AADFL 305