Pairwise Alignments

Query, 318 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., methionyl-tRNA formyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  231 bits (590), Expect = 1e-65
 Identities = 126/299 (42%), Positives = 180/299 (60%), Gaps = 6/299 (2%)

Query: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVY 63
           + + F GTPDFA   L  LI S H ++AVY+QP RP GRG+KLT SPV   A +  +PV+
Sbjct: 1   MRLAFMGTPDFAVPSLAELIASGHEIVAVYSQPPRPKGRGQKLTPSPVHAFAETMGLPVF 60

Query: 64  QPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPI 123
            P S++   A     SL+ D   VVAYG IL   VL+ PRLGC+N+HGS+LPRWRGAAPI
Sbjct: 61  TPESMKDAEAIDTFRSLDLDAACVVAYGQILKTEVLEAPRLGCLNLHGSLLPRWRGAAPI 120

Query: 124 QRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQAL 183
           QRA+ AGDK+TGV IMQM +GLD G +LL   + I  DDT+ASL E++A  G     +AL
Sbjct: 121 QRAIMAGDKQTGVQIMQMSLGLDEGPILLSELMDILPDDTAASLSERMAHVGAGLWPRAL 180

Query: 184 EGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFE--HQ 241
             +  G +   +Q      YA K++  EAR+ W++ AT++   +R  +P+P ++FE    
Sbjct: 181 AAIDRGGVTPSEQVGE-PTYARKITPAEARIVWSRPATEVDAHIRGLSPFPGAWFEAPSD 239

Query: 242 GNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADIL 300
              +++          + APGT+++     + V+ GD  + L+ +Q  GK   S  ++L
Sbjct: 240 AGPVRIKALLSGLADGSGAPGTVLD---DALAVACGDDAVRLIRVQREGKSAQSAEEML 295