Pairwise Alignments

Query, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 435 a.a., Ribosomal RNA small subunit methyltransferase B from Acinetobacter radioresistens SK82

 Score =  273 bits (698), Expect = 8e-78
 Identities = 169/427 (39%), Positives = 238/427 (55%), Gaps = 7/427 (1%)

Query: 1   MNLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTA 60
           +NLRA    ++  V ++G SLS+ L +Q   +A  +D+AL  EL  G +R    ++    
Sbjct: 11  LNLRAQVVHSLLAV-QQGQSLSLILNQQLNQVAD-RDRALFHELLLGTLRQWFALKSLAL 68

Query: 61  ECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR 120
             L KPL     ++   L +G YQ+  TRI  HAAISET  A +QL F  +  VVN +LR
Sbjct: 69  PLLTKPLNNP--VVETCLYLGLYQVLCTRIAPHAAISETVTATKQLGFHPLSGVVNAILR 126

Query: 121 NIQRQLTPLSNESETLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQSR 180
              R+ T     +   ++  P WL KRL   +P   Q + Q   +  P+ LR N+   SR
Sbjct: 127 RATRE-TEQFQHTLNQAHGLPSWLFKRLNKDWPEQIQSLSQNLKQSAPLTLRVNQRKISR 185

Query: 181 DEYLAALDKLEIDASAGL-SDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAPQ 239
           + YL  L  ++I A A + S+  I+L     +  LP + EG  SVQD  AQ + +LL   
Sbjct: 186 EAYLEQLHNIQIQAHACVVSEVGIVLDQSMPIRELPGYDEGWFSVQDEHAQLSTSLLPNL 245

Query: 240 ANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDAA 299
             + ++DACAAPGGK+ HLLE      L+A+D D +RL+R+ +NL RL L+A  +  +A 
Sbjct: 246 NTKTVIDACAAPGGKTAHLLEKYQPALLVALDQDPQRLKRITENLQRLDLEAGHVQIEAG 305

Query: 300 NIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLK 359
           +   W   +  D I+LDAPCSA GV+RRHPDI+ LR+  DI +  +LQ++IL H W+ L 
Sbjct: 306 DATRWQPEQPVDCIILDAPCSAIGVLRRHPDIRLLRQPSDIAQTVDLQKRILHHMWQQLN 365

Query: 360 PGGTLLYATCSILPQENRDQISAFLARTADAKLDTL-VQQASSQDIGWQITPGQHNMDGF 418
            GGTLLY TCSIL  EN  Q++ F     DA  D +       Q  G Q+ P   + DGF
Sbjct: 366 VGGTLLYITCSILKVENEQQMTQFFIEHKDAVEDKIQADWGIEQLYGRQLLPEPGHGDGF 425

Query: 419 YYARLLK 425
           YY R+ K
Sbjct: 426 YYCRIKK 432