Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., 3-oxoadipyl-CoA thiolase from Variovorax sp. OAS795

 Score =  292 bits (747), Expect = 1e-83
 Identities = 181/402 (45%), Positives = 234/402 (58%), Gaps = 21/402 (5%)

Query: 3   QAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTL 62
           QA I D +RTP GR   G   +VR + L A  ++ L+ RN  +D   + DV++GC  Q  
Sbjct: 4   QAFICDAVRTPFGRY-GGSLSSVRTDDLGAVPLRALMERNKNVDWQAVGDVLYGCANQAG 62

Query: 63  EQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMG 122
           E   N+AR ++LLAG+P   G  T+NRLCGS ++A+  AARAI  G     I GGVE M 
Sbjct: 63  EDNRNVARMSALLAGLPLELGGATINRLCGSGLDAVGTAARAIRAGEAGLMIAGGVESMS 122

Query: 123 HVPM------------NHGVDFHPG--LANNVAKAS---GMMGLTAEMLGKLHGITREQQ 165
             P             N   D   G    N + KA      M  TAE +   + I RE Q
Sbjct: 123 RAPFVMPKAESAFSRNNAVYDTTIGWRFVNKLMKAQYGVDSMPETAENVATDYKIGREAQ 182

Query: 166 DAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPV 225
           D  A+ S  RA A+   G F  EI  +      G  + V +DE  R ET+MESLA L+ V
Sbjct: 183 DLMALNSQLRAVASQKSGFFDAEIVPVSVPQKKGDALVVDKDEHPR-ETSMESLARLKGV 241

Query: 226 FDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPV 285
             P +GTVTAG +S ++DGA A+L+ +E+ A   GL  RAR+  MA AG    +MG GP 
Sbjct: 242 VRP-DGTVTAGNASGVNDGACALLLADEASAAKHGLTPRARVVGMATAGVAPRVMGIGPA 300

Query: 286 PATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPL 345
           PATQK LA  G+T++ +DVIELNEAFAAQ L  ++ LGL D  D ++N+NGGAIALGHPL
Sbjct: 301 PATQKVLALTGLTIDQIDVIELNEAFAAQGLAVLRLLGLQD-DDARVNINGGAIALGHPL 359

Query: 346 GCSGARISTTLINLMEHKDATLGLATMCIGLGQGIATVFERV 387
           G SGAR++TT +N +        L TMCIG+GQGIA + ERV
Sbjct: 360 GASGARLATTAVNQLHKGGGRYALCTMCIGVGQGIAVILERV 401