Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 377 a.a., thiolase family protein from Variovorax sp. OAS795

 Score =  322 bits (824), Expect = 1e-92
 Identities = 192/387 (49%), Positives = 250/387 (64%), Gaps = 13/387 (3%)

Query: 3   QAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTL 62
           +AVI    R+P   +K G    VR +TL+A +++GLL R   LDP  +ED+I GC     
Sbjct: 2   KAVISAYARSPFHFAKKGALAEVRPDTLAAGVVRGLLERT-DLDPALLEDIILGCAYPEA 60

Query: 63  EQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMG 122
            QG N+AR   LLAG+P   G +TVNR CGSSM+A+H AA  I  GMG+ F+  GVE M 
Sbjct: 61  SQGNNLARIVGLLAGLPHEVGGMTVNRFCGSSMQAVHIAAAQIEAGMGEAFLCIGVESMT 120

Query: 123 HVPMNHGVDFHPG--LANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAAT 180
            VP   G +F P   LA +   A   MG TAE + +   ++R  Q+AFAV SH++A AA 
Sbjct: 121 MVPQG-GFNFSPNPELAEST-DAYISMGETAENVAQRWNVSRADQEAFAVESHRKAAAAR 178

Query: 181 IEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSA 240
            EGR A EI  +    A+G   +V  D  IRP T+ E+LA L+P F P +G VTAGTSS 
Sbjct: 179 AEGRLAGEIVPVRL--ASGD--RVDADGCIRPATSAEALAGLKPAFRP-DGLVTAGTSSP 233

Query: 241 LSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVN 300
           L+DGA+ +L+  +S A   GL   ARI+S A  G D AIMG GP+PAT+KALARAG+T  
Sbjct: 234 LTDGAAVVLVTSDSFAAKHGLQALARIKSFATVGVDPAIMGIGPIPATRKALARAGLTAA 293

Query: 301 DLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
           DLDVIELNEAF++Q+L C++DLGL      K+NL+GG +A+GHPLG +GARI+    +L+
Sbjct: 294 DLDVIELNEAFSSQALACIRDLGL---DPAKVNLDGGGLAIGHPLGATGARITGKAASLL 350

Query: 361 EHKDATLGLATMCIGLGQGIATVFERV 387
             ++    LAT CIG GQGIAT+ ERV
Sbjct: 351 ARENGRYALATQCIGGGQGIATILERV 377