Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 391 a.a., acetyl-CoA C-acyltransferase FadA from Pseudomonas sp. S08-1

 Score =  502 bits (1292), Expect = e-147
 Identities = 249/386 (64%), Positives = 308/386 (79%)

Query: 2   KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQT 61
           + AVIVD  RTPMGRSK G+ RN RAET+SA L+ G+L RN +LDP  +EDVIWGCV QT
Sbjct: 6   RDAVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISGVLARNTKLDPAEVEDVIWGCVNQT 65

Query: 62  LEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHM 121
           LEQG+NIAR ASL+  IP T+   TV+RLCGSSM A+H A +AI TG GD F++GGVEHM
Sbjct: 66  LEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAVQAIQTGNGDVFVVGGVEHM 125

Query: 122 GHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATI 181
           GHV M HGVD +P L+   AKASGMMGLTAEMLGK+HGI+REQQDAF  RSH+ A+ AT+
Sbjct: 126 GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREQQDAFGERSHRLAHKATV 185

Query: 182 EGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSAL 241
           EG+F  EI  ++G+D  G L     DE IRPETT+ESLA L+P F+P  GTVTAGTSS +
Sbjct: 186 EGKFKDEIIPMQGYDENGFLKVFDFDETIRPETTIESLAALKPAFNPKGGTVTAGTSSQI 245

Query: 242 SDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVND 301
           +DGAS M++M   +A+ LG+   A +R+MAVAG D AIMGYGPVP+TQKAL RAG++++D
Sbjct: 246 TDGASCMIVMSAQRAQDLGIQPMAVVRAMAVAGVDPAIMGYGPVPSTQKALKRAGLSMDD 305

Query: 302 LDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLME 361
           +D +ELNEAFAAQ+LP +KDL LLD +++K+NL+GGAIALGHP GCSGARIS TL+N+M+
Sbjct: 306 IDFVELNEAFAAQALPVLKDLKLLDKMEQKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365

Query: 362 HKDATLGLATMCIGLGQGIATVFERV 387
               TLG++TMC+GLGQGI T+FERV
Sbjct: 366 QNGGTLGVSTMCVGLGQGITTIFERV 391