Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 391 a.a., 3-ketoacyl-CoA thiolase from Pseudomonas sp. RS175

 Score =  511 bits (1315), Expect = e-149
 Identities = 258/386 (66%), Positives = 308/386 (79%)

Query: 2   KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQT 61
           +  VIVD  RTPMGRSK G+ RN RAE +SA L+  LL RN ++DPN +EDVIWGCV QT
Sbjct: 6   RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNVKVDPNEVEDVIWGCVNQT 65

Query: 62  LEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHM 121
           LEQG+NIAR ASL+  IP T+   TV+RLCGSSM A+H AA+AIMTG GD F++GGVEHM
Sbjct: 66  LEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 125

Query: 122 GHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATI 181
           GHV M HGVD +P ++   AKASGMMGLTAEMLGK+HGITREQQDAF VRSHQ A+ AT+
Sbjct: 126 GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATV 185

Query: 182 EGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSAL 241
           EG+F  EI  ++G+D  G L     DE IRPETT+ESLA L+P F+P  GTVTAGTSS +
Sbjct: 186 EGKFKDEIIPMQGYDENGFLKLFDYDETIRPETTLESLATLKPAFNPKGGTVTAGTSSQI 245

Query: 242 SDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVND 301
           +DGAS M++M   +A+ LG+   A IRSMAVAG D AIMGYGPVPATQKAL RAG+++ D
Sbjct: 246 TDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSMAD 305

Query: 302 LDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLME 361
           +D IELNEAFAAQ+LP +KDL +LD +DEK+NL+GGAIALGHP GCSGARIS TL+N+M+
Sbjct: 306 IDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365

Query: 362 HKDATLGLATMCIGLGQGIATVFERV 387
               T G++TMCIGLGQGIATVFERV
Sbjct: 366 QNGGTFGVSTMCIGLGQGIATVFERV 391