Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., acetyl-CoA acetyltransferase (NCBI) from Escherichia coli BW25113

 Score =  317 bits (811), Expect = 5e-91
 Identities = 185/406 (45%), Positives = 251/406 (61%), Gaps = 24/406 (5%)

Query: 1   MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQ 60
           M++A I D IRTP+GR   G   +VRA+ L+A  ++ LL+RNP+LD   I+DVI GC  Q
Sbjct: 1   MREAFICDGIRTPIGRY-GGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQ 59

Query: 61  TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH 120
             E   N+AR A+LLAG+P++    T+NRLCGS ++A+  AARAI  G GD  I GGVE 
Sbjct: 60  AGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVES 119

Query: 121 MGHVPMNHGVD-------------------FHPGLANNVAKASGMMGLTAEMLGKLHGIT 161
           M   P   G                      +P +A      S  M  TAE + +L  I+
Sbjct: 120 MSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDS--MPETAENVAELLKIS 177

Query: 162 REQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAV 221
           RE QD+FA+RS QR   A   G  A+EI  +   +  G + ++  DE +RPETT+E L  
Sbjct: 178 REDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRG 237

Query: 222 LRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMG 281
           L+  F   NG +TAG +S ++DGA+A++I  E  A A GL  RARI +MA AG +  +MG
Sbjct: 238 LKAPFR-ANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMG 296

Query: 282 YGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIAL 341
            GPVPAT++ L RAG++++D+DVIELNEAFAAQ+L  +++LGL D     +N NGGAIAL
Sbjct: 297 LGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPH-VNPNGGAIAL 355

Query: 342 GHPLGCSGARISTTLINLMEHKDATLGLATMCIGLGQGIATVFERV 387
           GHPLG SGAR++    + +  ++    L TMCIG+GQGIA + ERV
Sbjct: 356 GHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILERV 401