Pairwise Alignments

Query, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 387 a.a., 3-ketoacyl-CoA thiolase from Alteromonas macleodii MIT1002

 Score =  572 bits (1475), Expect = e-168
 Identities = 281/387 (72%), Positives = 327/387 (84%)

Query: 1   MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQ 60
           MK+ V++DC+RTPMGRSK GVFRNVRAE LSA LM  LL RNP ++P  IED+IWGCVQQ
Sbjct: 1   MKEVVVIDCVRTPMGRSKNGVFRNVRAEDLSAALMTALLERNPGVNPAEIEDIIWGCVQQ 60

Query: 61  TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH 120
           T EQGFN+ARNA LL  IP+T GAVTVNRLCGSSM+A+H A   IM+G GD ++IGGVEH
Sbjct: 61  TKEQGFNVARNAQLLTQIPRTTGAVTVNRLCGSSMQALHDATSGIMSGRGDIYMIGGVEH 120

Query: 121 MGHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQRAYAAT 180
           MGHVPMN+ +DFHPGLA   AKASGMMG+TAE+LG+ +GITREQQDAF  RSHQ A+ A 
Sbjct: 121 MGHVPMNYNIDFHPGLAKYTAKASGMMGMTAELLGRQNGITREQQDAFGARSHQLAHKAH 180

Query: 181 IEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSA 240
           +EGR+A EI  +EGHDA G L  +  DEV+RPE+T ES+A LRPVFDPVNGTVTAGTSSA
Sbjct: 181 LEGRWANEIVPVEGHDANGVLKLIDYDEVVRPESTAESMAALRPVFDPVNGTVTAGTSSA 240

Query: 241 LSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVN 300
           LSDGAS ML+M   +A+ LGL  RA+IR+MAVAGCDAAIMGYGPVPATQKAL RAG+T++
Sbjct: 241 LSDGASGMLLMSADRAKELGLTPRAKIRAMAVAGCDAAIMGYGPVPATQKALKRAGLTMD 300

Query: 301 DLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
           D+++ E NEAFAAQ+L C+K LG +D +D KINLNGGAIALGHPLGCSG+RIS TLINLM
Sbjct: 301 DIELAEFNEAFAAQALSCIKQLGWMDHLDTKINLNGGAIALGHPLGCSGSRISGTLINLM 360

Query: 361 EHKDATLGLATMCIGLGQGIATVFERV 387
           E +D +LGLATMCIGLGQGIATVFERV
Sbjct: 361 ESQDVSLGLATMCIGLGQGIATVFERV 387