Pairwise Alignments

Query, 191 a.a., DNA-3-methyladenine glycosidase I (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 183 a.a., DNA-3-methyladenine glycosylase from Pseudomonas sp. S08-1

 Score =  213 bits (541), Expect = 2e-60
 Identities = 102/185 (55%), Positives = 127/185 (68%), Gaps = 4/185 (2%)

Query: 5   RCNWVSDDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAFAD 64
           RC W +DDPLY  YHD  WG P  DP+ LF  L L+G QAGLSWIT+L+K++ Y Q    
Sbjct: 3   RCFWCNDDPLYIAYHDQEWGVPQRDPQWLFEMLLLEGFQAGLSWITVLRKRERYRQVLFG 62

Query: 65  FEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSFVGG 124
           F+   +A   DA++EE M +PGI+RNR K+ +  +NA+ +L      ED  A LWSFVGG
Sbjct: 63  FDAERLAVMSDAEIEERMQDPGIIRNRAKLRAARQNAQAWLKL----EDPVALLWSFVGG 118

Query: 125 KPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDCVAY 184
            P++N F+   ++PA TPE+EAMSKALKKLGF FVGPTICYA+MQA GMV DH  DC  Y
Sbjct: 119 APKINHFSGRGEVPAMTPEAEAMSKALKKLGFTFVGPTICYAYMQAAGMVMDHTTDCDRY 178

Query: 185 DACCG 189
            A  G
Sbjct: 179 HALRG 183