Pairwise Alignments

Query, 688 a.a., glycyl-tRNA synthetase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 704 a.a., Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  486 bits (1250), Expect = e-141
 Identities = 297/705 (42%), Positives = 408/705 (57%), Gaps = 21/705 (2%)

Query: 1   MNFENLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVW--YAAPRRLALNI 58
           M  +NLL+EL  EELPPKAL+KL ++F     ++L    LA   A    +A+PRRLA ++
Sbjct: 1   MTAQNLLVELFVEELPPKALKKLGDAFATVLGDQLKAQGLAPADAAVTAFASPRRLAAHV 60

Query: 59  TELAIAQADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGI---TVDQAERLVTDKGEW 115
           + +    ADK V ++   VS   DA G+PT A        G     V   +R    K E 
Sbjct: 61  SGVLARAADKAVSQKLMPVSVGLDANGQPTPALLKRLAAIGADASAVAGLKRAPDGKAEA 120

Query: 116 LVYNAKVEGVETKSLVAAMAQRALDKLPIPKPMRW---------GSSKTQFIRPVHTATM 166
           L +++   G +  + +      A+ KLPIPK M +         G S   F+RP H    
Sbjct: 121 LFHDSIAPGADLAAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWSSVNFVRPAHGLVA 180

Query: 167 LLGSELIEGELLGIKSARNIRGHRFMG--TGFELDHADNYLTLLKEKGKVIADYESRKAL 224
           L G  ++  + LG+ +    +GHRF    +   L  AD+Y   L + G VIA +  RKA 
Sbjct: 181 LHGGSVVPVKALGLTARHTTQGHRFEAAVSPVVLKDADSYAATLAKDGAVIASFAERKAE 240

Query: 225 IKADAEKAAAKIGGTADI--EDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKG 282
           I      AAAK+GG      +DALL+EVT+LVE P VL   FE +FL VP E L+ TMK 
Sbjct: 241 IARQLAAAAAKVGGGCRPIDDDALLDEVTALVERPNVLICEFETEFLDVPQECLILTMKA 300

Query: 283 DQKYFPVFDDAGKLLPNFIFVANIESKDPAQIISGNEKVVRPRLADAEFFFNTDKKHTLE 342
           +QKYFP+ D  GKL   F+ V+NI   DP+ +I GNE+VVRPRLADA+FFF+ D+K TL 
Sbjct: 301 NQKYFPLLDAQGKLTHRFLVVSNISPSDPSAVIGGNERVVRPRLADAKFFFDQDRKKTLA 360

Query: 343 SRLPSLETVLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARAGLLSKTDLMTNMVM 402
           SR+  L  V++  +LGT  ++  R+  +A  IA++     +   +A  L+KTDL+T+MV 
Sbjct: 361 SRVEGLGKVVYHNKLGTQGERTERVREIARTIAQELRDLVLPVDKAAQLAKTDLLTDMVG 420

Query: 403 EFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVSCAVALADKLDTLVG 462
           EF + QGTMG +YA  DGE+E VA A+E+ YKP+F+GD +P       VALADKL+TLVG
Sbjct: 421 EFPELQGTMGRYYALHDGESEEVAFAIEDHYKPRFAGDELPRNMTGVVVALADKLETLVG 480

Query: 463 IFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQELHGANLSNANASEE 522
           +FGIG  P G  DPFALRR A+GV+R+++E +L L L TL+ KA ++ G  +++  A   
Sbjct: 481 MFGIGNLPTGDKDPFALRRHALGVVRLLIEKQLSLGLDTLLHKAAKVFGDKITDPTA--P 538

Query: 523 VLEFLMARFRAWYQDKGINVDVILAVLARRPTRPADFDSRINAVSHFRGLEASSALAAAN 582
           + +F+  R     +++G +   I AVLA RP   +D   R+ AV  F  L  + ALA+AN
Sbjct: 539 LADFIYDRLAGSLREQGYSAQEIDAVLALRPEPMSDIAKRLAAVRAFAALPEAPALASAN 598

Query: 583 KRVSNILAKVEGELPSSVNVALLSEAAEQALAAKLAELQPQLAPLFANADYQQALTLLAS 642
           KR+ NIL K EG   ++V   LL+E AE+ L   +    P     F   DY  +L  LA+
Sbjct: 599 KRIGNILKKSEG-TGAAVEAGLLAEPAEKELFDAMQTTVPAAHMQFDAGDYTASLQALAA 657

Query: 643 LRESVDQFFEDVMVMADDAALRNNRLALLNNLREQFLHVADISLL 687
           LR  VD FF+ VMV ADD AL+ NRL LL  L E    VAD+S L
Sbjct: 658 LRAPVDAFFDGVMVNADDPALKANRLGLLRQLHEAMNRVADLSRL 702