Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 273 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 3   EIEQALASPQLIAEKVLK-LPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCN 61
           +++QAL       E VL  LP   L + +   DP+     L  +I +D  LS  ++K+ N
Sbjct: 7   KVQQALVRAIDNDELVLPTLPEVALNIRQAAEDPEISISHLSKVIGRDTALSARLIKVVN 66

Query: 62  SPAFKRGEREVTSLQQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQV 121
           SP   R  +EVT L  A+ +LG           ++ ++   +     +   ++WR S++V
Sbjct: 67  SPLL-RATQEVTDLHTAITRLGTNYSSNLAIGLVMEQIFHARSDVVEQKMRDVWRRSLEV 125

Query: 122 AFLASEL----SEEDRDTAFLLGLLHDVGKLAIFKMLLDAF 158
           A ++  L    S+   D A L GL+H +G L I     D +
Sbjct: 126 AGVSYALCRSHSQLKPDQAALGGLVHQIGVLPILTYAEDHY 166