Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 290 a.a., conserved protein of unknown function containing an HDOD domain from Pseudomonas putida KT2440

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)

Query: 26  LELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALVQLGRE 85
           L+ ++ + DP  +T  +  LI QDP LS  +LKL NSP F    + + S+Q+A+  LG  
Sbjct: 29  LQFEQYMPDPDLET--IAKLISQDPGLSGALLKLVNSPHFGLSNK-IGSIQRAVNLLGSR 85

Query: 86  QLRRFVTSSLVR-EMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDRDTAFLLGLLHD 144
            +   + +  ++ EM D   +   RF       +M    LA     +  D A+ LGL HD
Sbjct: 86  SIINLINAQSIKGEMSDETIVTLNRFWDTAQDVAMTCLTLAKRTGIQAADEAYTLGLFHD 145

Query: 145 VGKLAIFK-------MLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLP 194
            G   + K       +L +A+ +A+   +      R   T  S+ +    AK W+LP
Sbjct: 146 CGVPLMLKRFPDYMDVLEEAYAKADEETRVVDTENRTFNTNHSV-VGYFTAKSWRLP 201