Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 288 a.a., HDOD domain-containing protein from Pseudomonas sp. SVBP6

 Score = 59.3 bits (142), Expect = 9e-14
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 12/177 (6%)

Query: 26  LELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALVQLGRE 85
           L+ ++ + DP  D + +  LI QDP LS  +LKL NSP +    + + S+Q+A+  LG  
Sbjct: 29  LQFEQYMPDP--DLEVIAKLISQDPGLSGALLKLVNSPYYGLSNK-IASIQRAVNLLGSR 85

Query: 86  QLRRFVTSSLVR-EMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDRDTAFLLGLLHD 144
            +   + +  ++ EM D   +   RF       +M    LA  +  +  D A+ LGL HD
Sbjct: 86  SIINLINAQSIKGEMSDDTIVTLNRFWDTAQDVAMTCLTLAKRIGSQAVDEAYALGLFHD 145

Query: 145 VGKLAIFK-------MLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLP 194
            G   + K       +L DA+  A   E        QV       +    AK W+LP
Sbjct: 146 CGVPLMLKRFPEYMSVLEDAYASA-GAEHRVVDTENQVFNTNHAVVGYYTAKSWRLP 201