Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 288 a.a., Predicted signal transduction protein from Pseudomonas sp. S08-1

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 10/181 (5%)

Query: 22  PSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALVQ 81
           P  +++L  +   P  D K +  LI QDP LS  +LK+ NSP F    R + S+QQA+  
Sbjct: 23  PQIMVDLQMEQFLPNPDLKAIARLISQDPGLSGALLKIVNSPFFGLSNR-IASIQQAVNL 81

Query: 82  LGREQLRRFVTSSLVR-EMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEEDRDTAFLLG 140
           LG   +   + +  ++ EM D   +   RF       +M    LA  +  +  D A+ LG
Sbjct: 82  LGCNSVINLINAQSIKGEMSDETIVILNRFWDTAQDVAMTCLTLAKRIGYQAPDEAYTLG 141

Query: 141 LLHDVGKLAIFK-------MLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQL 193
           L H+ G   + K       +L +A+  A   E+       +++      +    AK W L
Sbjct: 142 LFHNCGIPLMLKRFPNYMTVLEEAYFNAS-SERRVVDTENRLLNTNHAVVGYFTAKSWNL 200

Query: 194 P 194
           P
Sbjct: 201 P 201