Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 60.1 bits (144), Expect = 5e-14
 Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 17/255 (6%)

Query: 21  LPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALV 80
           +P    +L ++  +P  +   +   I  DP+++ +VL+L NS  F RG RE  S++ A  
Sbjct: 16  IPKVAQDLIQQFDNPNTNLDAVARNINLDPVIAAKVLRLANSARF-RGAREAHSVEDAAS 74

Query: 81  QLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEED---RDTAF 137
           +LG   LR  V +S V         +  +     W  S QVA +   L++      +TAF
Sbjct: 75  RLGFNTLRTLVLASAVTGAFKTDSGFDLK---AFWLQSFQVASICRLLAKTRGVAMETAF 131

Query: 138 LLGLLHDVGKLAIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKSL-----TLSALLAKHWQ 192
             G++H++G+L I     +   +     + ++   R  +    L      + A LA+ WQ
Sbjct: 132 TCGMMHNIGELLIQTGAPELAARLNRSGKTDA-AGRVALETLQLGFGFPEVGAELARRWQ 190

Query: 193 LPSTFETELDKLAHVHTRPNE-GIAAVVWRANVISEISMLQQA--SKLPADMLSNLLALV 249
           LP   +  +      H  P +  +  +V +A +I+E   L      K   ++ S L   +
Sbjct: 191 LPEVIQQAVALQTRPHQAPADMPLPRLVAQAVLIAEALRLHNGDLDKTREELDSPLCEGI 250

Query: 250 GLEQAQFDELHEKLQ 264
            L+ A FD+L E L+
Sbjct: 251 DLD-ALFDKLPEVLE 264