Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., Glutamate synthase [NADPH] large chain (EC 1.4.1.13) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 27/228 (11%)

Query: 16  EKVLKLPSKVL---ELDRKLADPQFDTKDLLA-----LIEQDPLLSVEVLKLCNSPAFKR 67
           EK+LK P+ +    ++ RKL +  FD +D+ A     LIE DP+L+ ++LK  NS AF  
Sbjct: 28  EKLLKQPNALPSAPKVVRKLIET-FDKEDVDAMLAASLIEDDPVLTAKLLKTANS-AFFG 85

Query: 68  GEREVTSLQQALVQLGREQLRRFV-TSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLAS 126
             R V++ + A+  LG  ++R  V  +SL      +  +   +F    WR+S+  A L+ 
Sbjct: 86  LHRSVSNARDAINVLGLIKVRALVIAASLGEGFHTVGGVNLNQF----WRYSLNTANLSR 141

Query: 127 ELS---EEDRDTAFLLGLLHDVGKLAIFKMLLDAFVQAEPG----EQPNSWLFRQVMTAK 179
            ++   + D +TAF  GL+H +G+L +   + +A +  +      +   +   R +    
Sbjct: 142 YIALPIKMDENTAFTAGLIHGIGELVMHVGMPEAMIDLDRSVPMLDLKRAKAERGLFGYS 201

Query: 180 SLTLSALLAKHWQLPS-TFETELDKLAHVHTRPNEGIAAVV----WRA 222
              + A LA+ W  P       L + A       E IA V+    WRA
Sbjct: 202 YAEVGAALAREWHFPKRMINAILHQTAPFDNDVYEPIAGVIHIGSWRA 249