Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 275 a.a., Conserved domain protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.8 bits (151), Expect = 8e-15
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)

Query: 3   EIEQALASPQLIAEKVLKLPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNS 62
           E+E  L  P+ +      +   + E++++   P    K +  L+  DP L+  VL+L NS
Sbjct: 2   ELEALLNYPRALPAMSRTVSDLLTEMNKEDPSP----KRVAGLVSHDPALTTRVLRLSNS 57

Query: 63  PAFKRGEREVTSLQQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVA 122
            AF R  R++ S ++A+  LG   +R  V ++ +       P        + WR+S++VA
Sbjct: 58  -AFFRVSRQIGSAEEAVALLGMTHVRSLVMAAALGSSFKNVPGVDM---VQFWRYSLRVA 113

Query: 123 FLASELS---EEDRDTAFLLGLLHDVGKLAIFKMLLDAF----VQAEPGEQPNSWLFRQV 175
            ++  LS    ++   AF  GL+H +G L +   + D      +   P +   +   R V
Sbjct: 114 DISRSLSSLLRQNEGNAFTAGLVHAIGDLIMHIAMPDVIGPIDMATPPLDLRRAEAERSV 173

Query: 176 MTAKSLTLSALLAKHWQLPSTFETEL 201
           +      + A +A+ WQ P+T  + L
Sbjct: 174 LGYTYAEVGAGMAEKWQFPTTIVSAL 199