Pairwise Alignments

Query, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., HDOD domain protein from Alteromonas macleodii MIT1002

 Score = 52.8 bits (125), Expect = 8e-12
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 22/193 (11%)

Query: 15  AEKVLKLPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTS 74
           A K   LP   + L   L DP+   +D+  LI  DP L+ ++L+L NS  F R   +V S
Sbjct: 10  AAKSFALPDICVRLRSTLDDPRSSAEDIGKLISADPSLTAKLLRLANSSLF-RFPSQVES 68

Query: 75  LQQALVQLGREQLRRFV---TSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEE 131
           + +A+  +G E L   V   T+S   +  D K I   +         M    LA  L+  
Sbjct: 69  VAKAISVIGGEALYNLVIAETASTAFKRFDTKLINLDKHWYASVYCGMVAKSLAMRLNVR 128

Query: 132 DRDTAFLLGLLHDVGKLAIFK---MLLDAFVQAEPGEQPN-------SWLFRQVMTAKSL 181
             +  F++G+L ++ +L + K       +++ AE    P+        + F Q       
Sbjct: 129 GAERFFVMGILQNLSELVVAKKETKRYQSYLNAETNGLPHVNQLDHFGFTFAQ------- 181

Query: 182 TLSALLAKHWQLP 194
             S ++ ++W+LP
Sbjct: 182 -CSGIILENWRLP 193