Pairwise Alignments

Query, 360 a.a., DNA replication and repair protein RecF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., DNA replication/repair protein RecF from Rhizobium sp. OAE497

 Score =  100 bits (248), Expect = 8e-26
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 28/349 (8%)

Query: 6   LNIDSFRNIQLAQLSPSEGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVIN-ND 64
           L +  FRN     L+      ++ G NG+GKT+++EA+ FL  GR  R      V     
Sbjct: 10  LKLTDFRNYAAVSLALDGRHVVLTGNNGAGKTNLMEAVSFLSPGRGLRRATYADVTRVGA 69

Query: 65  QDKLTLFATLNLPRGDSKIGLRRFRSGET---EVKIDGEKVKRLSTLAETLPIQVITPES 121
            +  ++FA L    G+ +IG     + +     ++I+G   K    L + L +  +TP  
Sbjct: 70  SNGFSIFAELEGIEGNVEIGTGADTADDNAARRLRINGTAAKTADELTDHLRVLWLTPSM 129

Query: 122 FSLLFEGPKSRRQFIDWGAFHTDPQFYAAWMNVRRVLKQRNQMLRNGSPYDQIQYWDREF 181
             L   G   RR+F+D      DP       +  R ++ RN++L +G        +D  +
Sbjct: 130 DGLFTGGSSDRRRFLDRLVLSLDPSHGRRASDFERAMRSRNKLLDDGR-------FDPSW 182

Query: 182 IRYTEQVTEIRNRYVDSLNELLKGIIGEFL---------PQVDVKVS------FTR-GWD 225
           +   EQ        +    + + G++   +         P   +++S      F+R   D
Sbjct: 183 LSGIEQQMASLGIAMALARQEMLGLLARLIEETRETSPFPSAALELSGFMDGQFSRPAVD 242

Query: 226 SKTDFAQLLESQYPRDLATGHTVSGPHKADLRLRVGTLPAQDA-LSRGQLKLLVCALRIA 284
            + D+A +L +   RD A G T+ GPH+ADL +R      + A  S G+ K L+  L +A
Sbjct: 243 LEDDYAAMLAASRYRDAAAGRTLDGPHRADLIVRHRDKQMEAARCSTGEQKALLVGLILA 302

Query: 285 QGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQLVDTGAQVFVTAIE 333
             +L+        I L+D++ + LD   R  L   +   G Q F+T  +
Sbjct: 303 HARLVANLTGHAPILLLDEIAAHLDEGRRAALFDLIDGLGGQSFMTGTD 351