Pairwise Alignments

Query, 360 a.a., DNA replication and repair protein RecF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 375 a.a., DNA replication/repair protein RecF from Bosea sp. OAE506

 Score =  100 bits (248), Expect = 8e-26
 Identities = 92/359 (25%), Positives = 150/359 (41%), Gaps = 26/359 (7%)

Query: 2   SLIRLNIDSFRNIQLAQLSPSEGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVI 61
           ++ RL +  FR+ Q   L+    I  + G+NG+GKT+ILEA+     GR  R      + 
Sbjct: 3   AVARLILQDFRSYQALDLAVGGQIIALCGENGAGKTNILEALSLFAPGRGLRRADLADMA 62

Query: 62  NNDQDKLTLF--------ATLNLPRGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLP 113
             + D             A L +  G +    +R R      +IDG         +E L 
Sbjct: 63  RQEGDGAFAVSIALADDGARLGVGLGPADAEGKRARL----ARIDGATAGSALAFSEHLR 118

Query: 114 IQVITPESFSLLFEGPKSRRQFIDWGAFHTDPQFYAAWMNVRRVLKQRNQMLRNGSPYDQ 173
           +  +TP+   L       RR+F+D      DP        + R L+ RN++L       Q
Sbjct: 119 VVWLTPDLDGLFRGAAGDRRRFLDRLVLAVDPAHATRSNALERALRSRNRILEESPHQGQ 178

Query: 174 -IQYWDREFIRYTEQVTEIRNRYVDSLNELLKGIIGEFLP----------QVDVKVSFTR 222
            +   +RE       V   R   V  L+ ++     E  P          ++D+ V+   
Sbjct: 179 WLDAVEREIAELGVAVAAARAETVARLSAIIAETRDEASPFPHAQLALAGEIDLLVARHA 238

Query: 223 GWDSKTDFAQLLESQYPRDLATGHTVSGPHKADLRLRVG--TLPAQDALSRGQLKLLVCA 280
             D++  +  LL     RD A G T++GP  +DL +R G   +PA    S G+ K L+  
Sbjct: 239 ALDAEDGYRALLRQGRARDRAAGRTLTGPQASDLEVRHGPKDIPAGQG-STGEQKALLIG 297

Query: 281 LRIAQGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQLVDTGAQVFVTAIEPAAIVD 339
           L +A  +L+        + L+D++ + LD + R  L + L   G QV++T  + A   D
Sbjct: 298 LVLAHARLVAAMSGLEPLVLLDEIAAHLDPRRRAALYEGLTALGCQVWMTGADAALFTD 356