Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 466 a.a., chromosomal replication initiator protein DnaA from Magnetospirillum magneticum AMB-1

 Score =  370 bits (950), Expect = e-107
 Identities = 207/470 (44%), Positives = 292/470 (62%), Gaps = 18/470 (3%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQA-EMDGDTLVLYAPNRFVLDWVRDKYINII 59
           MA S W +   RL+DE+    +  W+RP+   +M  D + L  P RF+ DWV   Y   I
Sbjct: 1   MAKSEWDRVKVRLKDEVGDAAYRSWLRPITLHDMSEDAVKLALPTRFMRDWVNTHYAERI 60

Query: 60  NQFFTEQMGNDAPKLR-----FDIGSRPS-AKKPEPAPVAAVRVPSPQTKASVGTAFNTT 113
              +    G + P +R      +     S A+    A VA V VPSP   A V  A    
Sbjct: 61  RTLW----GAENPAIRNVEIVVEAARAVSVAQNAAKASVAKV-VPSPAA-APVRAAAAPC 114

Query: 114 EPVANTNHRSN-----INPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTG 168
            P A  N  ++     ++  + F NFV GK N+   AAA +VAE    ++NPLFLYGG G
Sbjct: 115 APAAAPNADNDELGAPLDNRFTFKNFVVGKPNEFAWAAARRVAEADQVSFNPLFLYGGVG 174

Query: 169 LGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFID 228
           LGKTHL+HA+ + I + NP   V+Y+ +E+F+   ++AL+      FK  +RSVD L ID
Sbjct: 175 LGKTHLMHAIAHHIRERNPERSVLYLSAEKFMYRFIRALRGQDTMSFKEQFRSVDVLMID 234

Query: 229 DIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIE 288
           D+QF A KD +QEEFFHTFNAL++   QI++++D+ P +++G+E+RL+SR   GL   I 
Sbjct: 235 DVQFIAGKDATQEEFFHTFNALVDQGRQIVISADKSPSDLEGIEERLRSRMACGLVADIH 294

Query: 289 PPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPIT 348
               E R+ IL  KA++ G+ +P +V  F+A ++ SNVRELEGALNRV+A++   GR IT
Sbjct: 295 ATTYELRLGILHSKAEQMGVLVPQKVMEFLAHKIISNVRELEGALNRVVAHSQLVGRAIT 354

Query: 349 IDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSK 408
           ++  +E L DLL   ++ +TI+ IQK VAE++ IK+A+M S RRSR VARPRQ+AM L+K
Sbjct: 355 LETTQEVLHDLLRASDRRITIEEIQKKVAEHFTIKLAEMSSARRSRQVARPRQIAMYLAK 414

Query: 409 ELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 458
           +LT++SLPEIG  FGGRDHTTV+HA +K+ +L+E   +  ED   L R L
Sbjct: 415 QLTSRSLPEIGRKFGGRDHTTVMHAVKKVEELKECDQNFAEDVELLRRML 464