Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 464 a.a., chromosomal replication initiator protein DnaA from Kangiella aquimarina DSM 16071

 Score =  587 bits (1513), Expect = e-172
 Identities = 284/464 (61%), Positives = 366/464 (78%), Gaps = 4/464 (0%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN 60
           M  ++W+ C+ +LQ ELSA +F+ WI+PLQ +     + LYAPN F +DW+R +Y++ IN
Sbjct: 1   MMGNVWRSCLQKLQSELSATEFNTWIKPLQVKETDSEMALYAPNPFFVDWIRQQYLDRIN 60

Query: 61  QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVG----TAFNTTEPV 116
           ++  ++      ++   +G+   A +   +        +     +V     T+F  +E  
Sbjct: 61  EYIEQKDSASQKQISLHVGNLNQAAEQSSSASTVSSTSNGSAVENVNQVRSTSFAKSEQA 120

Query: 117 ANTNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLH 176
            +   ++N+NP + F NFVEGKSNQL +AAA QV ENPG AYNPLF+YGG GLGKTHL+H
Sbjct: 121 PSGFQQNNLNPNFIFSNFVEGKSNQLARAAAQQVTENPGEAYNPLFIYGGVGLGKTHLMH 180

Query: 177 AVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANK 236
           +VGN I++ NPNA+VVY+HSERF+ +MVKALQ   +++FK +YRSVDAL IDDIQFFANK
Sbjct: 181 SVGNAILEQNPNARVVYLHSERFMANMVKALQTGTMDKFKNFYRSVDALLIDDIQFFANK 240

Query: 237 DRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRV 296
            R+QEEFFHTFN L+E N Q+I+T DR+PKE++G+E+RLKSRFGWGLTVA+EPPELETRV
Sbjct: 241 GRTQEEFFHTFNNLIEKNKQVIITCDRFPKEVEGLEERLKSRFGWGLTVAVEPPELETRV 300

Query: 297 AILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 356
           AILM KA  S I LP+EVAFFIAKR+RSNVRELEGAL RVIANA FTGR IT+DFV++AL
Sbjct: 301 AILMSKAHSSKIELPNEVAFFIAKRIRSNVRELEGALKRVIANAQFTGRAITLDFVKDAL 360

Query: 357 RDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLP 416
           +DL+A Q+KL++I+NIQKTVA YYKIK++D+LS+RRSRS+ARPRQ+AMAL+K LTN SLP
Sbjct: 361 KDLIAAQDKLISIENIQKTVASYYKIKVSDLLSQRRSRSIARPRQMAMALAKNLTNHSLP 420

Query: 417 EIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 460
           EIGDAFGG+DHTTVLHACRKI QL+ ES DI+ED++NL+RTLSS
Sbjct: 421 EIGDAFGGKDHTTVLHACRKIEQLKGESIDIEEDFSNLLRTLSS 464