Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 462 a.a., chromosomal replication initiator protein DnaA from Dickeya dadantii 3937

 Score =  735 bits (1898), Expect = 0.0
 Identities = 373/462 (80%), Positives = 402/462 (87%), Gaps = 2/462 (0%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN 60
           M++SLWQQC+ RLQDEL A +FSMWIRPLQAE+  +TL LYAPNRFVLDWVRDKYIN IN
Sbjct: 1   MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYINNIN 60

Query: 61  QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVGTAFNTTEPVANTN 120
               +  G DAP LRF++GS+P           +   P+PQ +A+     +   P A   
Sbjct: 61  GLLNDFCGMDAPLLRFEVGSKPMTPAVVSTGHHSAAAPAPQARAASPVRPSWETPAAQAE 120

Query: 121 H--RSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAV 178
           H  RSN+NP + FDNFVEGKSNQL +AAA QVA+NPGGAYNPLFLYGGTGLGKTHLLHAV
Sbjct: 121 HTYRSNVNPKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAV 180

Query: 179 GNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDR 238
           GNGII   PNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDAL IDDIQFFANK+R
Sbjct: 181 GNGIIARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKER 240

Query: 239 SQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAI 298
           SQEEFFHTFNALLEGN QIILTSDRYPKEI+GVEDRLKSRFGWGLTVAIEPPELETRVAI
Sbjct: 241 SQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAI 300

Query: 299 LMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRD 358
           LM+KA E+ I LP EVAFFIAKRLRSNVRELEGALNRVIANANFTGR ITIDFVREALRD
Sbjct: 301 LMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRSITIDFVREALRD 360

Query: 359 LLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTNQSLPEI 418
           LLALQEKLVTIDNIQKTVAEYYKIK+AD+LSKRRSRSVARPRQ+AMAL+KELTN SLPEI
Sbjct: 361 LLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEI 420

Query: 419 GDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 460
           GDAFGGRDHTTVLHACRKI QLREESHDIKED++NLIRTLSS
Sbjct: 421 GDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS 462