Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 484 a.a., chromosomal replication initiator protein DnaA from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  273 bits (699), Expect = 7e-78
 Identities = 169/467 (36%), Positives = 247/467 (52%), Gaps = 13/467 (2%)

Query: 5   LWQQCIGRLQDELSAQQFSMWIRPLQAEMDG-DTLVLYAPNRFVLDWVRDKYINIINQFF 63
           +W +   RL+ E+    FS +I P    +D    L+L  P  +  DWVR   +  +N+ +
Sbjct: 16  IWSEASVRLRAEIGDGPFSSYIAPSAVRLDNAGHLILVTPTAYARDWVRKNALRRMNELW 75

Query: 64  TEQMGNDAP---KLRFDIGSRPSAKKPEPAPV--AAVRVPSPQTKASVGTAFNTTEPVAN 118
               G       + R ++GS P A    P  V  AA R+ +      +  A   +   A 
Sbjct: 76  LGLDGLSRRLEVRCRAEVGSAPPASAVMPGNVVDAAPRLAAFAATPQMAPAAPISADGAR 135

Query: 119 TNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAV 178
               + +     FD+FVEG+ N    A A QVA    G +NP+F  G  G GKTHLL+A+
Sbjct: 136 AVRAAGLQDRLTFDSFVEGQGNAFALAIAKQVASWADGHFNPVFFCGPYGYGKTHLLNAI 195

Query: 179 GNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDR 238
                +  P AKVVY+ +ERF+   VKA+Q+ +   FK   RS D L +DD+QF   K  
Sbjct: 196 AWEAQRLRPEAKVVYLTAERFLSTFVKAMQDRSTAAFKESLRSADMLLLDDVQFVGGKTS 255

Query: 239 SQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAI 298
           +QEE   T  AL+E   +I+ ++DR P  +  VE RL+S    GLT  +E  + E ++A+
Sbjct: 256 TQEELLSTLTALIEDGKRIVFSADRAPMALTEVEPRLRSHLAAGLTCPVEAGDRELKIAV 315

Query: 299 LMRKAQE-SGINLPD-----EVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFV 352
              + +  S + +       EV   +  R   ++RELEGA+N + A A      +++D  
Sbjct: 316 AQNRLKALSALGVVQGEANPEVLAQLVDRTPGSMRELEGAVNTLAAAAGARLSSVSVDEA 375

Query: 353 REAL-RDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELT 411
              L   +    E+ +T+D IQKTVA+++ +K AD+LS+RR+RSVARPRQ+AM L K+ T
Sbjct: 376 STLLGMAMRGGPERRITVDEIQKTVADHFNMKQADLLSERRTRSVARPRQIAMYLCKQHT 435

Query: 412 NQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 458
            +S P+IG  FGGRDHTTVLH  RKI +L  +   I  D   L R L
Sbjct: 436 TRSYPDIGRRFGGRDHTTVLHGVRKIEELMPQDDQIARDVEALTRKL 482