Pairwise Alignments

Query, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 520 a.a., chromosomal replication initiator protein DnaA from Agrobacterium fabrum C58

 Score =  252 bits (644), Expect = 2e-71
 Identities = 155/465 (33%), Positives = 256/465 (55%), Gaps = 33/465 (7%)

Query: 4   SLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYA-PNRFVLDWVRDKYINIINQF 62
           +L+++   RL+ ++  + ++ W   L+      ++V +  P  F+  W+ ++Y+++I   
Sbjct: 38  ALFERFSARLKAQVGPEVYASWFARLKLHTVSKSVVRFTVPTTFLKSWINNRYMDLITSL 97

Query: 63  FTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVP------SPQTKASVGTAFNTT--- 113
              +   D   L+ +I  R +++   PA       P      +P+ K+ + +   T    
Sbjct: 98  VQSE---DPDVLKVEILVRSASRPVRPAQTEERAQPVQEVGAAPRNKSFIPSQSATAPAA 154

Query: 114 EPVA----------NTNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGA--YNPL 161
           +P+A               S ++  + FD FVEG SN++  AAA  +AE   GA  +NPL
Sbjct: 155 QPMAAQATLRQGGSGPLFGSPLDTRFTFDTFVEGSSNRVALAAAKTIAEAGAGAVRFNPL 214

Query: 162 FLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRS 221
           F++ G GLGKTHLL A+ N  I +  N +VVY+ +E F+     A+++N     K   R+
Sbjct: 215 FIHAGVGLGKTHLLQAIANAAIDSPRNPRVVYLTAEYFMWRFATAIRDNDALTLKDTLRN 274

Query: 222 VDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGW 281
           +D L IDD+QF   K   Q EF H  N LL+   Q+++ +DR P E++ ++ R++SR   
Sbjct: 275 IDLLVIDDMQFLQGK-MIQHEFCHLLNMLLDSAKQVVVAADRAPWELESLDPRVRSRLQG 333

Query: 282 GLTVAIEPPELETRVAILMRKA-----QESGINLPDEVAFFIAKRLRSNVRELEGALNRV 336
           G+ + IE P+ + R  +L R+       +    + DE+   +AK + ++ RELEGA N++
Sbjct: 334 GMAIEIEGPDYDMRYEMLNRRMGSARQDDPSFEISDEILTHVAKSVTASGRELEGAFNQL 393

Query: 337 IANANFTGRPITIDFVREALRDLLALQE-KLVTIDNIQKTVAEYYKIKMADMLSKRRSRS 395
           +   +F    +++D V E L  L+   E K V I++IQ+ VA +Y +   +++S RR+R 
Sbjct: 394 MFRRSFEPN-LSVDRVDELLSHLVGSGEAKRVRIEDIQRIVARHYNVSRQELVSNRRTRV 452

Query: 396 VARPRQVAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQL 440
           + +PRQ+AM L+K LT +S PEIG  FGGRDHTTVLHA RKI  L
Sbjct: 453 IVKPRQIAMYLAKMLTPRSFPEIGRRFGGRDHTTVLHAVRKIEDL 497