Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 579 a.a., membrane protein insertase YidC from Magnetospirillum magneticum AMB-1

 Score =  253 bits (646), Expect = 1e-71
 Identities = 176/596 (29%), Positives = 274/596 (45%), Gaps = 75/596 (12%)

Query: 1   MESQRNILLIGLLFVSFLLWQQWQADKAPKPVAT---------ESSVVANATTNHSADVP 51
           M  QRN+ +   + V+ L+  Q+    A  PV           ++S  A A T  +A  P
Sbjct: 1   MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60

Query: 52  EADTGVPAAVAAT-----------QNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGK 100
               G PAA AA               I ++T  +   I   G  I    LV ++     
Sbjct: 61  AQVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAA 120

Query: 101 DQPFVLLEQTKD--------FTYIAQSGLIGRDGIDS--SAKGRAIFAASKTEFTLADGQ 150
           D   + L    +        F ++A    +   G DS   A+G      +       D  
Sbjct: 121 DSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTWDNG 180

Query: 151 DSLEVPLTYVAENGVTYTKVFVFHRGKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSE 210
           + L    TY  +    +              +  ++ N    P  +  Y  + +T  P  
Sbjct: 181 EGLRFVRTYTVDENYMF-------------GVAQRVENYGTKPASLHPYALLARTGTPHV 227

Query: 211 SSMMMPTYRGAAFSTASVRYEKYNFEDMGKNNLNQ-PTIGGWAAMLQHYFVSAWIPPATD 269
           + M +           +++  KY  +D+ K   ++  T GGWA +   Y+++A +PPA  
Sbjct: 228 AGMYILHEGPLGVFDGTLKEMKY--DDLKKEGSSRHKTTGGWAGITDKYWLTALVPPAKT 285

Query: 270 SNT---IFSSVSAGGLANIGFRGAVYDVAPGATQEISSQFYVGPKDQKALSALS-----D 321
             T   +   +       + +      + PG ++E     + G K    L   +     D
Sbjct: 286 EITGRFVHQRLGNADRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGID 345

Query: 322 TLNLVVDYGFLWWLAVPIHWLLMFYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAK 381
             +L +D+G+ ++L  P  +LL    S +GN G+AI+ +T+ ++  +FPL    Y +M K
Sbjct: 346 RFDLAIDFGWFYFLTKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGK 405

Query: 382 MRNLQPKLQDLKERFGDDRQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLE 441
           M+ LQPK+Q+L+ R+ DD+ ++ Q MM LYK EKVNP+ GCLPI++Q+P+F ALY VL  
Sbjct: 406 MKKLQPKVQELQARYADDKMRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFV 465

Query: 442 SFELRHAPFMLWIHDLSVQDPYYIL-------------------PLLMGVSMFIMQKMQP 482
           + E+RHAPF  WI DLS QDP  I                    PL+MGV+MF+ QK+ P
Sbjct: 466 TIEMRHAPFYGWISDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNP 525

Query: 483 IAPTMDPMQVKMMQWMPVIFTVFFLWFPSGLVLYWLVGNIVAIIQQKIIYAGLEKK 538
             PT DP+Q KMMQ++P+IFT     F SGLV+YW   N ++I+QQ +I    E+K
Sbjct: 526 -QPT-DPVQAKMMQFLPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 579