Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 535 a.a., membrane protein insertase, YidC/Oxa1 family, N-terminal domain from Kangiella aquimarina DSM 16071

 Score =  471 bits (1213), Expect = e-137
 Identities = 242/545 (44%), Positives = 337/545 (61%), Gaps = 21/545 (3%)

Query: 1   MESQRNILLIGLLFVSFLLWQQWQADKAPKPV--ATESSVVANATTNHSADVPEADTGVP 58
           MES R   ++G    SFLL+Q WQ D  P+P     E    +N   N   D         
Sbjct: 1   MESMRGFFILGFAICSFLLYQAWQKDYGPQPEQEVNEQFGQSNTVANSKVD--------- 51

Query: 59  AAVAATQNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLLEQTKDFTYIAQ 118
                T NLI V TD   ++I+ VGGD+VYA L  +  E   +Q   +L   +D  Y A+
Sbjct: 52  -----TNNLIEVVTDVFKIKIDRVGGDVVYAELNDYNKELNNEQEKAVLFDYRDRVYQAK 106

Query: 119 SGLIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAENGVTYTKVFVFHRGKF 178
           S L+G    D+    RA +   ++ ++L DGQD L +PLT+  + GV +TK F F+R  +
Sbjct: 107 SALLGTGAPDNQLP-RATYQTKQSSYSLQDGQDELIIPLTWANDEGVLFTKTFTFNRNDY 165

Query: 179 NVNIDYKINNTSAAPLQVQMYGQIKQTIKPS----ESSMMMPTYRGAAFSTASVRYEKYN 234
            + + YK+NN S+         ++ +  KP+    +SS  M  + G A+S    +YEK +
Sbjct: 166 EIGVQYKVNNQSSNDRTYNFVAELIRDQKPTGLEEKSSFGMSPFLGVAYSPEERKYEKIS 225

Query: 235 FEDMGKNNLNQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLANIGFRGAVYDV 294
           FED+ +  +N    GGW   LQHYF+SAWIP   +   + S+V +     I F      V
Sbjct: 226 FEDLEEEPINVTRQGGWIGYLQHYFISAWIPEQQEKIKVTSTVKSNQDTIIRFIQPTVAV 285

Query: 295 APGATQEISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHWLLMFYQSFVGNWG 354
                + I++  YVGPK  K L A +  L   +D  ++WW+ +P++ L+ F+ SFV NWG
Sbjct: 286 PAQGEKVINATLYVGPKILKRLEAAAPGLEKSLDLSWVWWIGLPLYKLMQFFYSFVANWG 345

Query: 355 VAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQKMGQAMMELYKKE 414
           VAIIL+TL V+ LL+PL+ AQY SMA MR L PK+Q LKER+G+D+Q+M Q MM++YK+E
Sbjct: 346 VAIILVTLVVKTLLYPLSAAQYRSMANMRKLAPKMQQLKERYGEDKQRMQQEMMKMYKEE 405

Query: 415 KVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYYILPLLMGVSM 474
             NP GGCLP+LLQ PIFIALY+VL E+ ELRHAPF  WI DLSV DPY++LPLLMG SM
Sbjct: 406 GANPFGGCLPMLLQFPIFIALYYVLFEAVELRHAPFFGWIQDLSVADPYFVLPLLMGGSM 465

Query: 475 FIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLWFPSGLVLYWLVGNIVAIIQQKIIYAG 534
           ++MQK+QP +PTMDPMQ K+M ++PV+FTVF L+FP+GLVLYWL  N++++ QQ+ I   
Sbjct: 466 WLMQKLQPQSPTMDPMQQKIMSYLPVVFTVFMLFFPAGLVLYWLCNNLISVAQQQYITKK 525

Query: 535 LEKKG 539
           +EK+G
Sbjct: 526 IEKQG 530