Pairwise Alignments

Query, 613 a.a., selenocysteine-specific translation factor from Klebsiella michiganensis M5al

Subject, 614 a.a., selenocysteinyl-tRNA-specific translation factor (NCBI) from Escherichia coli BW25113

 Score =  980 bits (2534), Expect = 0.0
 Identities = 489/612 (79%), Positives = 529/612 (86%), Gaps = 1/612 (0%)

Query: 1   MIIATAGHVDHGKTTLLQAITGINADRLPEEKARGMTIDLGYAYWPQPDGRVLGFIDVPG 60
           MIIATAGHVDHGKTTLLQAITG+NADRLPEEK RGMTIDLGYAYWPQPDGRV GFIDVPG
Sbjct: 1   MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG 60

Query: 61  HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGKPTLTVALTKADRVETA 120
           HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTG P LTVALTKADRV+ A
Sbjct: 61  HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA 120

Query: 121 RVEEVKAEAEAALAEFGFTGATLFTVAATEGLGIAGLRDHLLQLSARAHPQHQRFRLAID 180
           RV+EV+ + +  L E+GF  A LF  AATEG G+  LR+HLLQL  R H     FRLAID
Sbjct: 121 RVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAID 180

Query: 181 RAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVDKPMRVRGLHAQNQPVAKAWAGQRIALN 240
           RAFTVKGAGLVVTGTALSGEV VGD+LWLTGV+KPMRVR LHAQNQP   A AGQRIALN
Sbjct: 181 RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALN 240

Query: 241 IVGDAQKEDLNRGDWLLAVPPPEASERVIVELQCHTPLSQWQPLHIHHAASHITGRVSLL 300
           I GDA+KE +NRGDWLLA  PPE   RVIVELQ HTPL+QWQPLHIHHAASH+TGRVSLL
Sbjct: 241 IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL 300

Query: 301 EGALAELVLDTPLRLADNDRLVLRDISARLTLAGARVVTLNPPRRGKRKPEYLQWLHALA 360
           E  LAELV DTPL LADNDRLVLRDISAR TLAGARVV LNPPRRGKRKPEYLQWL +LA
Sbjct: 301 EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA 360

Query: 361 AAQGDDVQALDIHLQRDAVRLDDFAWARQLSDEGLKALINRPDYLQAGNSLLSAPLAARW 420
            AQ  D  AL +HL+R AV L DFAWARQL+ EG++ L+ +P Y+QAG SLL+AP+AARW
Sbjct: 361 RAQ-SDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARW 419

Query: 421 QRKLLDALARYHDQHRDEPGPGRERLRRIALPMEDEALVLLLIEQMRESGTVHSHHGWLH 480
           QRK+LD LA YH+QHRDEPGPGRERLRR+ALPMEDEALVLLLIE+MRESG +HSHHGWLH
Sbjct: 420 QRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLH 479

Query: 481 LPEHKAGFTDEQQAIWQRVVGLFADEPWWVRDLAREANVEESLMRAVLRQAAQQGMITAI 540
           LP+HKAGF++EQQAIWQ+   LF DEPWWVRDLA+E   +E  MR  LRQAAQQG+ITAI
Sbjct: 480 LPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAI 539

Query: 541 VKDRYYRNDRIVAFAKMIRELDLERGSTCAADFRDTLNVGRKLAIQILEYFDRIGFTRRR 600
           VKDRYYRNDRIV FA MIR+LD E GSTCAADFRD L VGRKLAIQILEYFDRIGFTRRR
Sbjct: 540 VKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRR 599

Query: 601 GNDHILRDKALF 612
           GNDH+LRD  LF
Sbjct: 600 GNDHLLRDALLF 611