Pairwise Alignments

Query, 513 a.a., xylose ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Pectobacterium carotovorum WPP14

 Score =  432 bits (1111), Expect = e-125
 Identities = 235/503 (46%), Positives = 332/503 (66%), Gaps = 12/503 (2%)

Query: 1   MSWLLEMKNITKTFGAVKAIDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYE 60
           M  LL+++ ITK+F  VKA+   +L +  G+V++L GENG+GKST+MKVL GIY   +  
Sbjct: 1   MQPLLQLQGITKSFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDA-- 58

Query: 61  GEIIFSGETLQPGHIRDTERKGIAIIHQELALVKHLTVLENIFLGAEIS-RHGLLDYETM 119
           G I F G+ +     + ++  GI IIHQEL L+  LT+ ENIFLG E + R G +D+  M
Sbjct: 59  GSIHFLGQEVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRFGRIDWNKM 118

Query: 120 TLRCEKLLAQVNLAISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETA 179
               +KLL ++NL       VGDL +G QQ+VEIAK L+ + +++I+DEPT +LT+ ETA
Sbjct: 119 YAEADKLLKRLNLRYDSRRMVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETA 178

Query: 180 ILLNIIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRNADGMSEDDIITMMV 239
            L ++I++LQ+ G   +YISH+L E+  I D I V RDGQ IG R    + ED +I MMV
Sbjct: 179 SLFSVIKELQSQGCGIVYISHRLKEIFEICDDITVFRDGQFIGERPVSDLEEDTLIEMMV 238

Query: 240 GRELTALYPSEAHSCGDEILRVENLTAWHPVNRHIKRVNDVSFSLRRGEILGIAGLVGAG 299
           GR+L   YP  +   G+  L+V+NL+           V  VSF++R+GEILG+AGL+GAG
Sbjct: 239 GRKLEDQYPRSSKVPGEVRLKVQNLSG--------PGVERVSFTVRKGEILGVAGLMGAG 290

Query: 300 RTEAVQCLFGVWPGRWQGKIFIDGQPVTIHTCQQAIAQGIAMVPEDRKKDGIVPVMAVGK 359
           RTE ++ L+G  P R  G + +DG+ V     Q  +A GI  + EDRK+DG+V  M+V +
Sbjct: 291 RTELMKILYGALP-RTGGNVTLDGRDVVTRKPQDGLANGIVYISEDRKRDGLVLGMSVKE 349

Query: 360 NITLAALNQFTGPLSSLDDAGEQLCIQQSIQRLKIKTSSPELAIGRLSGGNQQKAILARC 419
           N++L AL  F+     L  A EQL +   I+   +KT S E  IG LSGGNQQK  +AR 
Sbjct: 350 NMSLTALRYFSHAGGRLKHAEEQLTVADFIRLFNVKTPSMEQPIGLLSGGNQQKVAIARG 409

Query: 420 LLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMH 479
           L+  P +LILDEPTRG+D+GAK EIY+LINQ  ++G+++I++SSE+PEVLG+SDR++VMH
Sbjct: 410 LMTRPNVLILDEPTRGVDVGAKKEIYQLINQFKEEGLSIILVSSEMPEVLGMSDRIIVMH 469

Query: 480 EGKLKANLINQGLTQEQVMEAAL 502
           EG+L  +   +  TQE +M AA+
Sbjct: 470 EGRLSGDFPIEQATQEALMAAAV 492



 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 9/233 (3%)

Query: 20  IDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFSGETLQPGHIRDTE 79
           ++ VS  +  GE++ + G  G+G++ LMK+L G  P     G +   G  +     +D  
Sbjct: 268 VERVSFTVRKGEILGVAGLMGAGRTELMKILYGALPRTG--GNVTLDGRDVVTRKPQDGL 325

Query: 80  RKGIAIIHQEL---ALVKHLTVLENIFLGA-EISRH--GLLDYETMTLRCEKLLAQVNLA 133
             GI  I ++     LV  ++V EN+ L A     H  G L +    L     +   N+ 
Sbjct: 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSHAGGRLKHAEEQLTVADFIRLFNVK 385

Query: 134 I-SPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAILLNIIRDLQNHG 192
             S +  +G L  G QQ V IA+ L  +  +LILDEPT  +       +  +I   +  G
Sbjct: 386 TPSMEQPIGLLSGGNQQKVAIARGLMTRPNVLILDEPTRGVDVGAKKEIYQLINQFKEEG 445

Query: 193 IACIYISHKLNEVKAISDTICVIRDGQHIGTRNADGMSEDDIITMMVGRELTA 245
           ++ I +S ++ EV  +SD I V+ +G+  G    +  +++ ++   VG++  A
Sbjct: 446 LSIILVSSEMPEVLGMSDRIIVMHEGRLSGDFPIEQATQEALMAAAVGKQYGA 498