Pairwise Alignments

Query, 627 a.a., sigma-54-dependent Fis family transcriptional regulator from Klebsiella michiganensis M5al

Subject, 528 a.a., propionate catabolism operon regulatory protein PrpR from Escherichia coli ECOR27

 Score =  223 bits (567), Expect = 2e-62
 Identities = 137/338 (40%), Positives = 195/338 (57%), Gaps = 46/338 (13%)

Query: 309 TTWSFDDIIGQSPAILDVIKKAKLCARHELPIHILGDTGTGKELFAQSIHN-----HSAR 363
           T +   D++GQSP +  V +   L AR    + I G+TGTGKEL AQ+IH      H AR
Sbjct: 211 TRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDAR 270

Query: 364 ----SHSPFIAINCAAIPEGILESELFGYADGAFTSARKGGKPGVFEMAMNGTVFIDEIS 419
               SH PF+A+NC AI E +LE+ELFGY +GAFT +R+GG+ G+FE+A  GT+F+DEI 
Sbjct: 271 QGKKSH-PFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIG 329

Query: 420 EAPLSVQVKLLRVLQEKQFSRLGGDTLITADFRLITASNKDLRPLVASGEFRQDLYYRIN 479
           E PL +Q +LLRVL+EK+ +R+GG   +  D R+I+A++  L   +  G FR+DL+YR++
Sbjct: 330 EMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCKLEEDMQQGRFRRDLFYRLS 389

Query: 480 ILELSLPALCQRPGDIMPLIQHLLH--------------QQGKQITFTPDAVDFLHGYRW 525
           IL L LP L +R  DI+PL +  L               +QG Q + T      L  Y W
Sbjct: 390 ILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASET-----VLVHYDW 444

Query: 526 PGNIRELQAVIYRLIVLVDIDRVSKEILLQVSQISPDDDNEGSHLPATGVTSDETDLLKK 585
           PGNIREL+ ++ RL + + ++         +  + P+   E +  PA             
Sbjct: 445 PGNIRELRNMMERLALFLSVEPTPDLTPQFLQLLLPELARESAKTPA------------- 491

Query: 586 QEKRLIT--HVIEKTDGDRTKASVMLGISPTTLWRKLK 621
              RL+T    +EK +GD+T A+  LGIS TT WR+LK
Sbjct: 492 --PRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLK 527