Pairwise Alignments

Query, 653 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Klebsiella michiganensis M5al

Subject, 629 a.a., DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 599/653 (91%), Positives = 609/653 (93%), Gaps = 24/653 (3%)

Query: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF 60
           MAEFETTFADLGLKAPILEAL DLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
Sbjct: 1   MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF 60

Query: 61  SLPLLNNLDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120
           SLPLLNNLDPEL+APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
Sbjct: 61  SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180
           ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180

Query: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL 240
           HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWT +GMRKNEALVRFL
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI 300
           EAEDFDAAIIFVRTKNATLEVAEALERSGY+SAALNGDMNQ+LREQTLERLKDGRLDILI
Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360

Query: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD 420
           ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD 420

Query: 421 VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE 480
           +ETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDR  R  DRNDRGPRGDR     E
Sbjct: 421 LETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPR--DRNDRGPRGDR-----E 473

Query: 481 DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL 540
           +RP+RERRDVGDM+LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLF SHSTIEL
Sbjct: 474 ERPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL 533

Query: 541 PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERRE 600
           PKGMPGEVLQHFTRTRILNKPMNMQLLGDA P          GGERR GGRSF G  R  
Sbjct: 534 PKGMPGEVLQHFTRTRILNKPMNMQLLGDAVP--------HAGGERRGGGRSFSGERREG 585

Query: 601 GRGFGGERREGGRSEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA 653
           GR F GERREGGR +GRRFSGERRE         +  PRRDDS GRRRFGGDA
Sbjct: 586 GRNFSGERREGGRGDGRRFSGERRE---------SRGPRRDDSTGRRRFGGDA 629