Pairwise Alignments

Query, 653 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Klebsiella michiganensis M5al

Subject, 629 a.a., inducible ATP-independent RNA helicase (VIMSS) from Escherichia coli BW25113

 Score = 1145 bits (2963), Expect = 0.0
 Identities = 597/653 (91%), Positives = 609/653 (93%), Gaps = 24/653 (3%)

Query: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF 60
           MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLL GRDVLGMAQTGSGKTAAF
Sbjct: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF 60

Query: 61  SLPLLNNLDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120
           SLPLL NLDPEL+APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
Sbjct: 61  SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180
           ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180

Query: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL 240
           HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWT +GMRKNEALVRFL
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI 300
           EAEDFDAAIIFVRTKNATLEVAEALER+GY+SAALNGDMNQ+LREQTLERLKDGRLDILI
Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360

Query: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD 420
           ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALL+KIQP+AEGEELD
Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD 420

Query: 421 VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE 480
           +ETLAAALLKMAQGER LI+PPDAPMRPKREFRDRDDR  R  DRNDRGPRGDR     E
Sbjct: 421 LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPR--DRNDRGPRGDR-----E 473

Query: 481 DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL 540
           DRP+RERRDVGDM+LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLF SHSTIEL
Sbjct: 474 DRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL 533

Query: 541 PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERRE 600
           PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQP          GGERR GGR FGG  R  
Sbjct: 534 PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHT--------GGERRGGGRGFGGERREG 585

Query: 601 GRGFGGERREGGRSEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA 653
           GR F GERREGGR +GRRFSGERREG          APRRDDS GRRRFGGDA
Sbjct: 586 GRNFSGERREGGRGDGRRFSGERREG---------RAPRRDDSTGRRRFGGDA 629