Pairwise Alignments

Query, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score =  347 bits (889), Expect = e-100
 Identities = 178/290 (61%), Positives = 216/290 (74%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRGLSLASVSGEDLQSLLAERQTGGY 67
           I++FLDALWLE+ L++NT  AYR DL +   WL  + L L +   E +   LA R    Y
Sbjct: 9   IDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAWRLEQNY 68

Query: 68  KATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLV 127
           K  STAR LS VR F+++L REK+   DP+  +  P+L + LPK LSEA VE LL AP +
Sbjct: 69  KPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLAAPDL 128

Query: 128 EQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAVL 187
            + +  RD+AMLEVLYA GLRV+EL+ LT+  ++LRQGVLRV+GKG+KERLVP+GEEA++
Sbjct: 129 SEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIV 188

Query: 188 WVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           WVE Y+   R  LL G  SDVLFPS R +QMTRQTFWHRIKH A +AGI  + LSPH LR
Sbjct: 189 WVERYMRDARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGI-GKALSPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+ +H +HHPR
Sbjct: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPR 297