Pairwise Alignments

Query, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  360 bits (925), Expect = e-104
 Identities = 187/290 (64%), Positives = 222/290 (76%), Gaps = 1/290 (0%)

Query: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRGLSLASVSGEDLQSLLAERQTGGY 67
           I+QFLDALWLE+ L++NT  +YR DL +   WL    +SL     + +   LA R   GY
Sbjct: 9   IDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGY 68

Query: 68  KATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLV 127
           K  STAR LS +R FF++L REK+   DP+  +  P+L + LPK LSEA VE LLQAP +
Sbjct: 69  KPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDL 128

Query: 128 EQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAVL 187
            + +  RD+AMLEVLYA GLRV+ELV LT+  ++LRQGVLRV+GKG+KERLVP+GEEAV+
Sbjct: 129 GEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPMGEEAVV 188

Query: 188 WVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLR 247
           W+E Y   GR  LLNG  SDVLFPSQR +QMTRQTFWHRIKH+A +AGID + LSPH LR
Sbjct: 189 WLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGID-KPLSPHTLR 247

Query: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297
           HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+QLH QHHPR
Sbjct: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPR 297