Pairwise Alignments

Query, 577 a.a., ssDNA exonuclease RecJ from Klebsiella michiganensis M5al

Subject, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dianthicola ME23

 Score =  865 bits (2234), Expect = 0.0
 Identities = 432/576 (75%), Positives = 494/576 (85%), Gaps = 1/576 (0%)

Query: 1   MKQQIQLRRREAVDGVDLPADLPPLLQRLYASRGVRSAQELERGVKGMLPWSQLTGVEKA 60
           M    QLRRR   +  +LP  LP LL+RLYA RGVR  QELER ++G+L +  L G+ +A
Sbjct: 1   MNVATQLRRRPTTE-TELPDSLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQA 59

Query: 61  VEILYGAFKQGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE 120
           VE+L  A      I+VVGDFDADGATSTAL+VLALR++G   + YLVPNRFEDGYGLSPE
Sbjct: 60  VEVLRQALADNRRIMVVGDFDADGATSTALTVLALRSMGGREIQYLVPNRFEDGYGLSPE 119

Query: 121 VVDQAHARGAQLIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGDSLPAAEAIINPNLR 180
           VV QA A+GA+LI+TVDNGISSHAGVD AH  GI V+VTDHHLPG++LPAAEA+INPNL 
Sbjct: 120 VVAQAAAKGAELIVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLS 179

Query: 181 DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPL 240
           DC FPSK+LAGVGVAFYLM+ALR  LR+ GWF ERG+A PNLA+LLDLVALGTVADVVPL
Sbjct: 180 DCAFPSKALAGVGVAFYLMMALRANLRESGWFAERGLAEPNLAELLDLVALGTVADVVPL 239

Query: 241 DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM 300
           DANNRIL  QGLSRIRAGKCRPGI+ALLE++NRD  +L ASDLGFALGPRLNAAGRLDDM
Sbjct: 240 DANNRILISQGLSRIRAGKCRPGIRALLEVSNRDAVQLVASDLGFALGPRLNAAGRLDDM 299

Query: 301 SVGVALLLCDNTGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAM 360
           SVGV LLLCD+  +AR+LA++LDALNQ+R+EIE GMQ EAL LCE+LERS +TLP GLAM
Sbjct: 300 SVGVELLLCDDIVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRDTLPLGLAM 359

Query: 361 YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP 420
           YHP+WHQGVVGILASRIKERFHRPVIAFAP GDG LKGSGRSI GLH+RDALERLDT +P
Sbjct: 360 YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHP 419

Query: 421 GLIMKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSME 480
           GL++KFGGHAMAAGLSL E RF+EF+QRF ELV EWLD + L+G V SDG L   E+++ 
Sbjct: 420 GLMLKFGGHAMAAGLSLVEDRFDEFRQRFAELVGEWLDASQLEGVVWSDGELAIPELTLG 479

Query: 481 VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS 540
            A+MLR+AGPWGQ FPEP FDGRFRLLQQRLVGERHLKVMVEP+GGGPLLDGIAFN+DT 
Sbjct: 480 TAEMLREAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNIDTL 539

Query: 541 LWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWP 576
           LWPD+ VREV+LAYKLD+NEFRG RS+QL+I+HLWP
Sbjct: 540 LWPDSSVREVELAYKLDVNEFRGKRSVQLLIEHLWP 575