Pairwise Alignments

Query, 577 a.a., ssDNA exonuclease RecJ from Klebsiella michiganensis M5al

Subject, 573 a.a., Single-stranded-DNA-specific exonuclease RecJ from Alteromonas macleodii MIT1002

 Score =  624 bits (1610), Expect = 0.0
 Identities = 317/567 (55%), Positives = 420/567 (74%), Gaps = 5/567 (0%)

Query: 10  REAVDGVDLPADLPPLLQRLYASRGVRSAQELERGVKGMLPWSQLTGVEKAVEILYGAFK 69
           R  V G  L +DL P++ R+Y  R + +  +LE G+KG+  ++ L G+ +A +IL  A  
Sbjct: 7   RREVTGASLSSDLHPVIDRIYRGRNIANLDDLENGLKGLTHFNVLKGMPQAAQILANAVV 66

Query: 70  QGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPEVVDQAHARG 129
           Q   I++VGDFDADGATST++ +LALRA+GY NV +LVPNRF+ GYGLS  +VD+A  +G
Sbjct: 67  QNKRIIIVGDFDADGATSTSVCILALRAMGYHNVDFLVPNRFDFGYGLSVPIVDEAAKQG 126

Query: 130 AQLIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGDSLPAAEAIINPNLRDCEFPSKSL 189
           A++I+TVDNGIS   GV HA +LG+ V+VTDHHLPGD LP A+AI+NPN   CEFPSK+L
Sbjct: 127 AEVIVTVDNGISCIDGVTHAKSLGMQVVVTDHHLPGDVLPPADAIVNPNQPGCEFPSKNL 186

Query: 190 AGVGVAFYLMLALRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPLDANNRILTW 249
           AGVGVAFY+MLAL+  L+ +G FE  G+APPNLA LLD+VA+GTVADVV LD NNRIL  
Sbjct: 187 AGVGVAFYIMLALKAELQQQGHFERAGLAPPNLASLLDIVAVGTVADVVVLDKNNRILVH 246

Query: 250 QGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLC 309
           QGL RIRAGKCRPGIKAL+E+ANRD   L ++DLGF +GPRLNAAGRLDDMS G+A LL 
Sbjct: 247 QGLQRIRAGKCRPGIKALVEVANRDCAHLTSTDLGFVVGPRLNAAGRLDDMSQGIACLLE 306

Query: 310 DNTGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAMYHPQWHQGV 369
           D T +AR++A ELDALN+ R+EIE GM+A+A  + E++      +P  L +Y   +HQGV
Sbjct: 307 DETIQARMIAAELDALNKERREIETGMKAQAEIVLEQMALDEGDMPSALVVYREDFHQGV 366

Query: 370 VGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYPGLIMKFGGH 429
           +GI+A R+KE++ +PVIAFA   D  +KGS RSI G+H+RD L+ ++T YPG+I KFGGH
Sbjct: 367 IGIVAGRLKEKYLKPVIAFAHQDDEIIKGSARSIPGVHIRDVLDEVNTRYPGVIEKFGGH 426

Query: 430 AMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGE--VVSDGPLTAAEMSMEVAQMLRD 487
           AMAAGLSL  A+ +EF+Q F ++    +  A L G   ++SDG L++ E+ +  A +LR 
Sbjct: 427 AMAAGLSLPVAKLQEFEQAFVDIARAHM--AKLDGNHALLSDGDLSSKELCLPFAHLLRQ 484

Query: 488 AGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTSLWPDNGV 547
           AGP+GQ F  PLFDG F LL QRLVG++HLK++++  G    +D IAFNVD   WP+  V
Sbjct: 485 AGPFGQGFESPLFDGEFALLDQRLVGQKHLKMVLKSDGANE-VDAIAFNVDLKSWPNAMV 543

Query: 548 REVQLAYKLDINEFRGNRSLQLIIDHL 574
           + V +AY+LDIN FRG  ++QLI++ +
Sbjct: 544 KRVHIAYRLDINVFRGQETVQLIVEQI 570