Pairwise Alignments

Query, 492 a.a., multidrug resistance transporter from Klebsiella michiganensis M5al

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  162 bits (410), Expect = 3e-44
 Identities = 140/496 (28%), Positives = 219/496 (44%), Gaps = 21/496 (4%)

Query: 1   MIKITPPPRIWRTSALAFA-----------LTLLTGCALIQDDPGQVPLVNPQQAELAQV 49
           + K +P PR +R  A +             L LL     I  D  +  +V P Q + AQ 
Sbjct: 19  LAKNSPLPRTFRLCAFSLTTFASKLAPTMGLALLLSACAIGPDYQRPEVVEPAQFKEAQG 78

Query: 50  IHLANSGWPTAR--WWEGYQDPQLNMLVNRALQNSPTMQAARLRISQSQSTVELAQSAMG 107
              A      AR  WWE Y D QLN LV R    + T+  A  R  Q+Q+   LA+S+ G
Sbjct: 79  WRQATPSDSLARGAWWELYGDRQLNDLVMRLNTANQTVAQAEARFRQAQA---LARSSRG 135

Query: 108 V-QATAVAAQNRLRVTNKQFTWPYSFSLPVDKNGPWYTLNTVGVGATLNIDLWGADRARV 166
               T   +  + R +  Q T   + SL    +G   TLN   +G +   D+WG  R  +
Sbjct: 136 AFYPTVDLSVGKTRAS--QGTGSSNASLSSSSSGIRDTLNAQ-LGVSWEADIWGKLRRGL 192

Query: 167 AAAIGEKNARQAETAGIELDLASSVAQLYFAMQATFQKIELLNQLEAIASLSVQAHEHRT 226
            A      A  A+ A + L   S + Q Y  ++   ++  LL         S+Q  E++ 
Sbjct: 193 EANEASAEASSADLAAMRLSQQSELVQSYLQLRVMDEQTRLLQATLETYQRSLQMTENQY 252

Query: 227 ARGVEDSVDVANAQDELLAAQQQVITAQGTITQYRETLRALIGADAHSMPEIHPVALPAL 286
             GV     VA AQ +L   Q  +I       Q    +  LIG    +        +PAL
Sbjct: 253 RAGVSGKDAVAQAQTQLKTTQASLIDLIWQRAQLENAIAVLIGEAPANFNLAVSKDIPAL 312

Query: 287 QETLPDSLSFELLARRPDLQALRGYVSASMSQVDAAKAAFYPHFDIKAFWGYNALSVGDL 346
            + +P SL  +LL RRPD+ +    V A+ + +  AKAA+YP   +    GY++ +  D 
Sbjct: 313 PQ-IPVSLPSQLLERRPDIASAERSVIAANANIGVAKAAYYPDLSLSLAGGYSSSTYADW 371

Query: 347 FKSSFQQINILPGLYLPLFDGGRLNATLKSTRTASNILIKQYNQAVLDAVRDVAISSSQL 406
                +  ++ P L + LFDGG+ +A +  T  + +  + +Y Q VLD  R+V     QL
Sbjct: 372 ISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQL 431

Query: 407 NDLNQQAALQQQKVTAAMVTTRSASAHHQRGLVSYYAAQEARRPAIAQQLLLLDIQVQRL 466
             L  +A +  + + AA  + R     ++ GL++Y      +  A++ +  +L +   RL
Sbjct: 432 KVLEDEAVVSNEALEAARESLRLTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQTRL 491

Query: 467 STDITLIKALGGDYRG 482
              + LI ALGG + G
Sbjct: 492 VASVQLIAALGGGWDG 507